Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1175 ATGGCTGGGATTTCCAGCATAATGGGGCATGAGAAATGTCAAAGATACTTAATTTTTAATGCAGAAACTGCTCTTGGGGATTATTTTCGGGTGTTTTTGTATTTTCTTGGCCTTGCCTATTGTTTCCTTGGATTATCGGCTATAACGGCCCGATTCTTTAAATCTATGGAAAACGTAGTTAAGCACACGAGGGAGGTAGTTGAGGTTGATCCTGTTACTAAAATTGAAGTGATTAGACATGAGAAGGTTTGGAATTACACGATCGCGGATATTAGCTTGTTAGCCTTTGGAACTAGCTTTCCTCAGATATCATTAGCCACCATTGATGCTATACAAAATCTGGGGAACTTGAATGCTGGAGGTTTGGGACCTGGAACACTAGTTGGTTCTGCAGCATTTGACCTTTTCCCCATCCATGCTGTTTGTGTGGTAGTTCCGAAAGCAGGAGAACTAAAAAAGATTGCTGATCTAGGAGTATGGCTGGTGGAGCTGTTTTGGTCATTTTGGGCTTACATTTGGTTATACATTATTTTGGAGGTATGGACTCCAAACGTGGTGACTCTATGGGAGGCCTTGTTGACTGTTCTGCAGTATGGATTATTGTTGACTCATGCGTATGCTCAAGACAAACGCTGGCCCTATATTTCTCTACCTATTGCGAGAGATGAGAGGCCAGAGGATTGGGTGCCAGAAGAGACTCCTTGTTTTAAACAAAAATCCCATGAGAAGGTCGAGTACTCTGAGATAATTCAAGTTAATGAAGAAGATAGGGACACTGTTGATATTTTTTCCATTCATTCATCAAACCCCAGAGATACAACAATGTACACAAGAGTACCTCAAATAGATGGCATTATAGAAAATTCTGACAAAGCAAAAGACTCAATGTTGGAGGATACCCATTTACTTACAATTTGGGGACAGCAATTTGTGGATGCTCTAATGTTGGAGAGCCATGAATCTAAAAAAATGAATAATGTCTATCTCCGCATAGCTCAAATTTGCTGGCAATTGCTGCTTTTACCATGGAGGTTTCTGTTTGCTTTTGTTCCTCCATGCCATATTGCTCATGGATGGATCTCTTTCATTTGCTCTCTGCTTTTCATCAGTGGGATAGCTTACATTGTGACTAAGCTCACAGACCTTATAAGTTGTGTCACAGGAATAAATGCTTATGTCATTGCATTCACAGCACTAGCCAGTGGTACCTCGTGGCCTGATTTAGTGGCAAGCAAGATTGCTGCTGAACGTCAAAAAACTGCAGATTCTGCAATTGCAAATATCACCTGCAGCAATTCTGTGAATATATATGTTGGCATTGGTGTTCCATGGCTTATTGATACTTTGTACAACTTCATAGCATATAGAGAACCTCTCCATATCCAAAATGCAGGGGGACTAAGCTTTTCATTGATTGTTTTCTTCTGCACTTCTGTTGGGTGTATCTCAGTTTTGGTTGTTAGGCGTCTAGTTTTCGGTGCAGAGCTAGGAGGGCCAAGGCTCTGGGCATGGATTACCGCTGTGTTCTTCATGTTCCTGTGGATTATTTTTGTTGTACTATCTTCACTCAAGGTTTCCGGATTCATTTAG 1590 0.4107 MAGISSIMGHEKCQRYLIFNAETALGDYFRVFLYFLGLAYCFLGLSAITARFFKSMENVVKHTREVVEVDPVTKIEVIRHEKVWNYTIADISLLAFGTSFPQISLATIDAIQNLGNLNAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEVWTPNVVTLWEALLTVLQYGLLLTHAYAQDKRWPYISLPIARDERPEDWVPEETPCFKQKSHEKVEYSEIIQVNEEDRDTVDIFSIHSSNPRDTTMYTRVPQIDGIIENSDKAKDSMLEDTHLLTIWGQQFVDALMLESHESKKMNNVYLRIAQICWQLLLLPWRFLFAFVPPCHIAHGWISFICSLLFISGIAYIVTKLTDLISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLHIQNAGGLSFSLIVFFCTSVGCISVLVVRRLVFGAELGGPRLWAWITAVFFMFLWIIFVVLSSLKVSGFI* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1175 529 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 221 271 - -
Lja5g1175 529 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 304 529 - -
Lja5g1175 529 Pfam Sodium/calcium exchanger protein 358 521 IPR004837 GO:0016021|GO:0055085
Lja5g1175 529 Pfam Sodium/calcium exchanger protein 34 206 IPR004837 GO:0016021|GO:0055085
Lja5g1175 529 Gene3D - 311 523 IPR044880 -
Lja5g1175 529 Gene3D - 86 220 IPR044880 -
Lja5g1175 529 PANTHER SODIUM/CALCIUM EXCHANGER 3 212 - -
Lja5g1175 529 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 3 212 - -
Lja5g1175 529 PANTHER SODIUM/CALCIUM EXCHANGER 221 271 - -
Lja5g1175 529 PANTHER SODIUM/CALCIUM EXCHANGER 304 529 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1175 5 529 Antiporters AT2G47600 71.940 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1175 K03452 K05849 gmx:100792839 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1175 5 11804789 11809233 Lja5g1175 5 11804789 11809233 ECH