Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1150 ATGGCAACAATCAAGGTTCATGGAACCCCCTTTTCAACCGCAACCATGCGAGCCACTGCTACTCTGTATGAGAAACAGCTTGAATTTGAGTTTGTTCCCATTGACATGCGCAATGGTGAACAAAAAAATGAACCCTTCCTTTCACTCAATCATAGTTTTGCTAACTTTATACTCCCTCCGTTCCAAAATTATTGTAAATCAAGGGCCATAACACAATACATAGTTCACGAGTATGCTGATAAGGGGACAGAGCTGGTAAGCAAAGACTCCAAGAAGATGGCGGTAATCGCGGTGTGGCTAGAAGTCGAGGCCCATCATTTCGAACAACCAGCTTCAAAACTGGTGTTTGAGCTGGCTTTGAAGCCTATGTTTGGGATGACTACGGATCCTGCAGCTGTGGAAGAGAATGAAACCAAGCTGGCTGGTGTTCTTGATGTTTATGAGAAAAGATTGTCTGGGTCCAAATACTTAGCAGGTGAATGCTTCACCTTGGCAGATCTGCATCACCTTCCTAACATTTTCTACTTGATGAACTCACAGAGCAAGAAGCTGTTTGAATCAAGGCCTCATGTGAATGCTTGGGTGGCTGATATCACAGCAAGACCAGCTTGGTCTAAGGTCCTAGCCATGTTACCTCCTAAGCCGTGA 648 0.4475 MATIKVHGTPFSTATMRATATLYEKQLEFEFVPIDMRNGEQKNEPFLSLNHSFANFILPPFQNYCKSRAITQYIVHEYADKGTELVSKDSKKMAVIAVWLEVEAHHFEQPASKLVFELALKPMFGMTTDPAAVEENETKLAGVLDVYEKRLSGSKYLAGECFTLADLHHLPNIFYLMNSQSKKLFESRPHVNAWVADITARPAWSKVLAMLPPKP* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1150 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 215 IPR010987 -
Lja5g1150 215 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Lja5g1150 215 CDD GST_C_Phi 91 208 IPR034347 -
Lja5g1150 215 Pfam Glutathione S-transferase, C-terminal domain 117 202 IPR004046 -
Lja5g1150 215 SFLD Glutathione Transferase (cytosolic) 1 210 IPR040079 -
Lja5g1150 215 SFLD Main.5: Phi-like 1 210 - -
Lja5g1150 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 211 - -
Lja5g1150 215 SUPERFAMILY Thioredoxin-like 1 81 IPR036249 -
Lja5g1150 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 82 IPR004045 -
Lja5g1150 215 SUPERFAMILY GST C-terminal domain-like 82 209 IPR036282 -
Lja5g1150 215 Gene3D Glutaredoxin 1 86 - -
Lja5g1150 215 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 211 - -
Lja5g1150 215 Gene3D - 88 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1150 Lja-Chr5 11602227 11603836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1150 6 210 Glutathione S-transferase Gene Family AT2G47730 56.190 4.44e-78 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1150 K00799 - gmx:100799868 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1150 5 11602227 11603836 Lja5g1150 5 11602227 11603836 ECH