Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1149 ATGGCGCTGAAGCTCTATGGTCTGGCCTTGTCCACAAACACTACTCGTGCCATGATCTGTCTCCATGAGAAAGAGGTGGATTTTGAGTTTGTTCCTGTCAATGTGTTCGCTGCAGAGCATAAACTGCCTCCTTTTCTCTCAAAAAATCCCTTTGGTTTGATTCCAGTACTTGAAGATGATGATCTCACTCTCTTTGAATCCAGAGCCATAACCGCATACGTAGCTGAGAAATTCAAGGAAGCAGGACCTGATCTGATTCGTCACAAGGACCCAAAAGAAGCAGCACTGGTCAAAATGTGGACAGAGGTAGAGTCTCACTACTACGACCCAGCAGTGTCACCCATCATCTATGAACACTTCGTGGCTCCATTCCGAGGCCAAGAACCCAACAAGTCAGTGATTGACACCAACGTTGAGAAGCTGAAGAGTGTGCTCGATGTGTATGAGGCTAAGTTGAGCAGCACAAAGTACCTTGCTGGGGATTTCTACAGTCTTGCTGATCTTAGCCATGTCCCTGAAACTCACTACTTTATGCAGACACCTTGTGCTGAGTTGATCAATGATCGTCCCCATGTTAAGGCTTGGTGGGAGGATGTTTCTTCTAGGCCTGCTTTTGAGAAAGTTGTGGGGGGAATGACTTTTGGTCAGAAATCAGAAAATAATCAGAAGTGA 672 0.4598 MALKLYGLALSTNTTRAMICLHEKEVDFEFVPVNVFAAEHKLPPFLSKNPFGLIPVLEDDDLTLFESRAITAYVAEKFKEAGPDLIRHKDPKEAALVKMWTEVESHYYDPAVSPIIYEHFVAPFRGQEPNKSVIDTNVEKLKSVLDVYEAKLSSTKYLAGDFYSLADLSHVPETHYFMQTPCAELINDRPHVKAWWEDVSSRPAFEKVVGGMTFGQKSENNQK* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1149 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 223 IPR010987 -
Lja5g1149 223 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Lja5g1149 223 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 218 - -
Lja5g1149 223 SUPERFAMILY GST C-terminal domain-like 73 213 IPR036282 -
Lja5g1149 223 SFLD Main (cytGST) 1 212 - -
Lja5g1149 223 Gene3D Glutaredoxin 1 86 - -
Lja5g1149 223 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Lja5g1149 223 CDD GST_C_Phi 92 209 IPR034347 -
Lja5g1149 223 SFLD Main.5: Phi-like 1 212 - -
Lja5g1149 223 Pfam Glutathione S-transferase, C-terminal domain 120 203 IPR004046 -
Lja5g1149 223 PANTHER GLUTATHIONE S-TRANSFERASE F13 2 218 - -
Lja5g1149 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Lja5g1149 223 CDD GST_N_Phi 2 77 - -
Lja5g1149 223 Gene3D - 87 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1149 Lja-Chr5 11581657 11583129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1149 1 215 Glutathione S-transferase Gene Family AT3G62760 60.930 1.51e-101 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1149 K00799 - gmx:100815147 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1149 5 11581657 11583129 Lja5g1149 5 11581657 11583129 ECH