Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1111 ATGGGGTCGAAACCGTGGCTGCATCCTGCTCCTCCTTACCGACCACTTGAATCGCACTGGGACACCGATGAAGACGATCCTGGTCCTCGCTGTGGTCACACGCTCACTGCTGTAGCCGCCACCAAGTCGCGCGGTCCGCGCTTAATCCTCTTCGGCGGCGCCACCGCCATTGAAGGAGGATCTACTTCAGCTCCCGGCATTCGATTGGCTGGAGTAACGAATTCCGTGCATTCTTATGATGTTCAAACGAAGAAATGGACTCGTCTTAAACCGGCCGGAGAGCCGCCGTCTCCTCGGGCTGCCCATGCTGCCGCGGCAGTTGGTACCATGGTCGTTTTTCAGGGTGGGATTGGTCCTGCTGGACATTCGACTGATGATATCTATGTGCTGGACTTGACCAATGACAAATACAAATGGCACAGAGTCGTTGTACAAGGGATAGGACCGGGGCCTCGCTACGGACATGTAATGGACTTGGTTGCTCAGAGATATCTCGTCACTGTCAGTGGAAATGATGGAAAACGAGTTGTATCTGATGCTTGGGCTTTAGATACTGCTCAAAAACCTTACGCGTGGCAGAGGCTGAACCCAGAGGGTGATAGACCTTCTGCTAGAATGTACGCAACTGCTAGTGCCCGCTCAGATGGGATGTTTTTACTATGTGGTGGAAGAGACGCTTCGGGAACTCCACTAGCAGATGCCTATGGACTACTCATGCATAGGAACGGGCAGTGGGAATGGACCCTTGCACCTGGAGTTTCCCCTTCACCGAGATATCAGCATGCCTCGGTTTTTGTTGGTGCACGATTACATGTTACAGGAGGTGTTCTCAGGGGTGGGCGATCTGTGGAAGGAGAAGCATCTGTTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTGGACAGAAATGGCATTGTGTCCTCCTCCCGCTCAAACAAAGGTCATGATCATGACCCTGCTTTGGAGCTTATGCGTCGTTGCCGCCATGCAGCAGCAGCTGTTGGTGTTCAAATCTATATCCACGGCGGTCTTAGAGGAGATACACTACTAGATGATTTCTTAGTGGCTGAAAATTCGCCATTTCAGCCTGACAATTCTCATGCGTTAACAGCTGAGAGAACATCACCTCTTACAAGTCCCAAATACAATCAGTCTAACTTCAGCTTGGATGGTACACAAGACGGACCCTCGTCTGGCGGCTCAGGGATGGACAAACATTCGATGGAGAAACTGAGGGAGGCATCAGCTGCTGAAGCTGAGGCAGCGAGTGCGGTCTGGCAAGCTGTGCAAGCTATATCTGCGGAAGAAACTTCTGTGTCAGATGACAACTCACAAGCTGCAGAAACCGTTTCAGATGGAAGCGATACAGAGGGAGATGTTCACCTTCATCCTAGAGCTGTTGTAGTTGCGAAAGAAACTGTAGGTAACCTAGGTGGAATGGTGAGACAATTGTCTCTGGATCAATTTGAAAATGAAAGCAGACGCATGGTTCCCATGAATAATGATTCGCCTTATCCTACGAAAAAATTCACCAGGCAGAAATCCCCTCAGGGTTTGCATAAAAAGATAATTTCGACTTTGCTCAGGCCTCGCAACTGGAAAGCTCCTGTTAACAGACGGTTCTTCTTGGATTCGTATGAAGTGGGTGAGCTTTGCTATGCTGCTGAGCAAATATTTATGCAGGAACAAACTGTTCTTCAGCTAAAAGCTCCAGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCAACTGCTGGAGACATCACGTATATTGATTACTTGTTTTTGGGAGATTATGTTGATCGAGGACAGCACAGCTTGGAAACCATTACCTTGCTACTTGCTCTTAAGGAAGGCTACTGTTTAATCGAATATCCTGAGAATGTTCATTTGATACGTGGAAACCATGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGCATAGAGTGCATTGAGAGAATGGGAGAAAATGATGGAATATGGGCATGGACGCGATTCAATCAACTTTTTAACTTTCTTCCACTAGCTGCTCTTATTGAAAAGAAAATTATCTGTATGCATGGTGGGATTGGAAGATCTATCAATTCGGTAGAACAGATAGAGAAGCTTGAGAGGCCCATAACAATGGATGCAGGATCCATCATTTTAATGGACCTTTTGTGGTCTGATCCCACAGAAAATGATAGTGTAGAGGGTTTGAGACCAAATGCTAGAGGGCCAGGGCTTGTCACTTTTGGGCCTGATCGTGTCACAGACTTCTGTAAGAGAAATAAATTACAGCTCATAATAAGGGCCCATGAATGCGTCATGGATGGTTTTGAGCGATTTGCCCAGGGACAATTAATCACCCTTTTTTCCGCAACTAACTATTGCGGAACTGCAAACAATGCGGGAGCTATACTGGTAATTGGTAGGGGTTTGGTTGTGGTTCCAAAGTTGATTCATCCTATACCACCTCCCCTTCAGTCACCTGAAACATCTCCAGAGCGTGTGATGGATGAGACATGGATGCAGGAACTTAATATTCAAAGGCCGCCAACTCCTACTAGGGGTCGACCACAGCCTGACCTTGATCGTGGCTCTCTAGCATATATATGA 2640 0.4735 MGSKPWLHPAPPYRPLESHWDTDEDDPGPRCGHTLTAVAATKSRGPRLILFGGATAIEGGSTSAPGIRLAGVTNSVHSYDVQTKKWTRLKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDIYVLDLTNDKYKWHRVVVQGIGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWALDTAQKPYAWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGTPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHASVFVGARLHVTGGVLRGGRSVEGEASVAVLDTAAGVWLDRNGIVSSSRSNKGHDHDPALELMRRCRHAAAAVGVQIYIHGGLRGDTLLDDFLVAENSPFQPDNSHALTAERTSPLTSPKYNQSNFSLDGTQDGPSSGGSGMDKHSMEKLREASAAEAEAASAVWQAVQAISAEETSVSDDNSQAAETVSDGSDTEGDVHLHPRAVVVAKETVGNLGGMVRQLSLDQFENESRRMVPMNNDSPYPTKKFTRQKSPQGLHKKIISTLLRPRNWKAPVNRRFFLDSYEVGELCYAAEQIFMQEQTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKEGYCLIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNFLPLAALIEKKIICMHGGIGRSINSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVIGRGLVVVPKLIHPIPPPLQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1111 879 SUPERFAMILY Kelch motif 70 356 IPR015915 GO:0005515
Lja5g1111 879 Gene3D - 500 851 IPR029052 -
Lja5g1111 879 CDD MPP_Bsu1_C 523 830 IPR041758 -
Lja5g1111 879 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 879 - -
Lja5g1111 879 SMART pp2a_7 543 832 IPR006186 GO:0016787
Lja5g1111 879 MobiDBLite consensus disorder prediction 854 879 - -
Lja5g1111 879 ProSitePatterns Serine/threonine specific protein phosphatases signature. 645 650 IPR006186 GO:0016787
Lja5g1111 879 SUPERFAMILY Metallo-dependent phosphatases 524 840 IPR029052 -
Lja5g1111 879 Pfam Galactose oxidase, central domain 29 96 - -
Lja5g1111 879 MobiDBLite consensus disorder prediction 435 452 - -
Lja5g1111 879 MobiDBLite consensus disorder prediction 361 416 - -
Lja5g1111 879 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 879 - -
Lja5g1111 879 Gene3D - 194 394 IPR015915 GO:0005515
Lja5g1111 879 PRINTS Serine/threonine phosphatase family signature 682 708 IPR006186 GO:0016787
Lja5g1111 879 PRINTS Serine/threonine phosphatase family signature 606 633 IPR006186 GO:0016787
Lja5g1111 879 PRINTS Serine/threonine phosphatase family signature 794 810 IPR006186 GO:0016787
Lja5g1111 879 PRINTS Serine/threonine phosphatase family signature 712 739 IPR006186 GO:0016787
Lja5g1111 879 PRINTS Serine/threonine phosphatase family signature 772 792 IPR006186 GO:0016787
Lja5g1111 879 PRINTS Serine/threonine phosphatase family signature 571 598 IPR006186 GO:0016787
Lja5g1111 879 PRINTS Serine/threonine phosphatase family signature 644 668 IPR006186 GO:0016787
Lja5g1111 879 Pfam Calcineurin-like phosphoesterase 571 783 IPR004843 GO:0016787
Lja5g1111 879 Gene3D - 8 193 IPR015915 GO:0005515
Lja5g1111 879 MobiDBLite consensus disorder prediction 435 461 - -
Lja5g1111 879 PIRSF STPPP_BSU1 1 879 IPR012391 GO:0004721|GO:0009742
Lja5g1111 879 MobiDBLite consensus disorder prediction 361 400 - -
Lja5g1111 879 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1111 Lja-Chr5 11159654 11175560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1111 551 775 Calmodulin-binding Proteins AT5G63870 30.268 1.98e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1111 K01090 - gmx:100805538 1592.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1111 5 11159654 11175560 Lja5g1111 5 11159654 11175560 ECH