Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1108 ATGACTGGAACAGACATGACTGGTGGTAATGAAGTCAACCTCATTGAATCTAAGAATGTTGTGCCACTCAATACATGGGTGCTTATCTCCAATTTCAAGCTGGCTTACAATCTTTTGAGACGTGCTGATGGAACATTCAATCGAGAGTTGGCAGAGTTCCTTGACCGCAAGGTCCCCTGCAACACCATTCCTGTTGATGGAGTGTTCTCTTTCGACCATGTCGATCGAAACACTGGCCTCTTTAGCAGGGTGTATCAACAAGCTCCTGAGAATGTGTCTCGGTGGGGGATTATAGATTTTGAAAAGTCCCTCAGCACCAAGCGTATTGTCCCGGTCATTATTTTCTTCCATGGTGGAAGCTTCTCACATTCCTCTGCCAACAGTGCTATCTACGACACTTTCTGCCGCCGCCTAGTGAGCAATTGTGAGGCTGTTGTGGTTTCTGTGAATTACCGGCGATCGCCCGAGCACCGGTATCCATGTGCGTATGATGACGGCTGGTCTGCGCTTATGTGGGTTAAATCAAGGGCATGGCTTCAGAGTGGAAAGGATTCTAAGGTTTATGTGTACTTGGCAGGGGATAGTTCCGGCGGTAATATTGCTCACCATGTCGCTGTTAGGGCTGCAGAGGAAGATGTTGAGGTGCTAGGTAATATTCTTCTTCATCCGCTGTTTGGCGGGGAGAAGCGAACGGAATCAGAGAAGAAACTTGATGGGAAGTACTTTGTGAGGTTGCAAGACCGCGACTGGTATTGGCGAGCTTTTCTTCCCGAAGGCGAGGATAGAGACCATCCTGCTTGTAACCCGTTCGGCCCCAGGGGTAGAAGCATTGCAGGACTCAAGTTCCCCAAAAGCCTTGTTTGTGTGGCGGGTTTAGATCTCCTCCAAGATTGGCAATTGGAATATGTGGAAGGTCTCAAGAATTCAGGCCATGATGTTAACCTTCTTTACCTTAAGGAGGCGACTATCGGATTCTACTTCTTGCCGAACAATGATCATTTCTATTGCCTCATGAAGGAGATGAAGAACTTCGTGAGTTCTAACTGTTAA 1050 0.4762 MTGTDMTGGNEVNLIESKNVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPCNTIPVDGVFSFDHVDRNTGLFSRVYQQAPENVSRWGIIDFEKSLSTKRIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSNCEAVVVSVNYRRSPEHRYPCAYDDGWSALMWVKSRAWLQSGKDSKVYVYLAGDSSGGNIAHHVAVRAAEEDVEVLGNILLHPLFGGEKRTESEKKLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPRGRSIAGLKFPKSLVCVAGLDLLQDWQLEYVEGLKNSGHDVNLLYLKEATIGFYFLPNNDHFYCLMKEMKNFVSSNC* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1108 349 Gene3D alpha/beta hydrolase 2 347 IPR029058 -
Lja5g1108 349 Pfam alpha/beta hydrolase fold 113 326 IPR013094 GO:0016787
Lja5g1108 349 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 189 201 IPR033140 -
Lja5g1108 349 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 113 129 IPR002168 GO:0016787
Lja5g1108 349 PANTHER ARYLACETAMIDE DEACETYLASE 7 346 - -
Lja5g1108 349 PANTHER GIBBERELLIN RECEPTOR GID1B 7 346 - -
Lja5g1108 349 SUPERFAMILY alpha/beta-Hydrolases 103 345 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1108 Lja-Chr5 11109732 11112372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1108 6 347 Carbohydrate Esterase AT3G63010 76.676 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1108 K14493 - gmx:100804463 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1108 5 11109732 11112372 Lja5g1108 5 11109732 11112372 ECH
Lja1g1181 1 12103771 12106591 Lja5g1108 5 11109732 11112372 ECH
Lja1g1181 1 12103771 12106591 Lja5g1108 5 11109732 11112372 PCT