Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1083 ATGGCAGATTTGAAACTCCATGGATTTTGGTATAGTCCTTTTACTTTCAGGGTGCTATGGACCCTAAAGCTGAAGGGCATACCATTTGAGTACATTGAGGAAGATCGCTTCAACAAGAGTCCTCAACTTCTTCAATACAACCCAGTGCACAAGAAAACTCCAGTGTTCGTTCATGATGGAAAACCCATATGTGAATCCATGATCATTGTTGAATACATTGATGAGTTATGGACACAGAATCCACTAGTTCCTTCTGATCCTCATGTGAAAGCTGTGGCACGGTTTTGGGTTAGATATGTCGAGGATATGATTTCTGCAGTTGCATCACCACTCTTTCGTAGCAATGGCAGTGCAGAGCGAGAGAAGGTTATAAAGGATATATGGGAGCGATTCGGAGTTATTGAGGATCAGTGTTTGGGTGATAAGAAATTCCTTGGAGGAGACACTTTGAACATTGTGGACATAGCTTTTGGGTCTTTTGTGAAATTTCTTGTGTTTATGGGAGATGTGGTTGAAGTGGAGATCCTAGAAGCTGAGAAATTCCCTCGTTTGCATACATGGTTTAACAATTTCATGGATGTTCCGGTCATCAGAGACAACACCCCTGAGCATGAGAAATTGGTGGCTTTGATGAAGTCTCTAAGAGAACAAATTTTGGCACCTTCCAGAAAATGA 675 0.4163 MADLKLHGFWYSPFTFRVLWTLKLKGIPFEYIEEDRFNKSPQLLQYNPVHKKTPVFVHDGKPICESMIIVEYIDELWTQNPLVPSDPHVKAVARFWVRYVEDMISAVASPLFRSNGSAEREKVIKDIWERFGVIEDQCLGDKKFLGGDTLNIVDIAFGSFVKFLVFMGDVVEVEILEAEKFPRLHTWFNNFMDVPVIRDNTPEHEKLVALMKSLREQILAPSRK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1083 224 CDD GST_N_Tau 4 77 - -
Lja5g1083 224 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 217 - -
Lja5g1083 224 SUPERFAMILY Thioredoxin-like 3 103 IPR036249 -
Lja5g1083 224 SFLD Glutathione Transferase (cytosolic) 1 221 IPR040079 -
Lja5g1083 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Lja5g1083 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 222 IPR010987 -
Lja5g1083 224 SUPERFAMILY GST C-terminal domain-like 75 216 IPR036282 -
Lja5g1083 224 SFLD Main.3: Omega- and Tau-like 1 221 IPR045073 -
Lja5g1083 224 Gene3D - 83 223 - -
Lja5g1083 224 Pfam Glutathione S-transferase, C-terminal domain 103 193 IPR004046 -
Lja5g1083 224 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Lja5g1083 224 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Lja5g1083 224 Gene3D Glutaredoxin 1 82 - -
Lja5g1083 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 217 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1083 Lja-Chr5 10858977 10860266 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1083 3 218 Glutathione S-transferase Gene Family AT2G29460 42.922 9.73e-59 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1083 K00799 - gmx:547584 299.286