Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1082 ATGGCAGATTTGAAAGTCCATGGATTTTGGTTTAGTCCTTATACTTGGAGGGTAATATGGACCCTGAAGCTAAAGGGTATGCCATATGAGTACATAGAGGAAGATAACTCCAACAAGAGTCCTCAACTTCTTAAATACAACCCAGTTCACAAGAAGGTTCCGGTGCTTGTTCATGCCGGAAAACCCATATGTGAGTCCATGATCATTGTTGAATACATTGATGAGTTATGGTCTCAGAATTCACTGGTTCCTGCTGATCCTTATGAGAAAGCTGTGGCACGGTTTTGGGTTAGATATGTCGAGGACATGATTTCTGCAGCTGCAGCACAAGTCTTCAGTAACGCTAATGGTAGTGAAGAGCAACAGAGGGTTATAAATGATATATGGCAAGGATTCAGAGTTATTGAGGATCAGTGTTTTGGTAACCACAAGAAATATTTTGGTGGTGACACTTTGAACACTCTGGACATAGCTTTTGGGTCTTTTGTGAAAATTCTTGTGGGTCTAGGAGATGTGTTTGAAGTGAAGATGCTACCAGCTGAGAGTTTCCCTCGCTTGCATACATGGTTTAACAATTTCATGGATGTTCCGATCATAAGAGACAATAGCCCTGACCATGAGAAATTGGTGTCTACTTTGAAGTATTTCATGGAAAAAGCTTTGGGATCTTCATCTTCCTAA 681 0.4082 MADLKVHGFWFSPYTWRVIWTLKLKGMPYEYIEEDNSNKSPQLLKYNPVHKKVPVLVHAGKPICESMIIVEYIDELWSQNSLVPADPYEKAVARFWVRYVEDMISAAAAQVFSNANGSEEQQRVINDIWQGFRVIEDQCFGNHKKYFGGDTLNTLDIAFGSFVKILVGLGDVFEVKMLPAESFPRLHTWFNNFMDVPIIRDNSPDHEKLVSTLKYFMEKALGSSSS* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1082 226 SUPERFAMILY Thioredoxin-like 3 103 IPR036249 -
Lja5g1082 226 CDD GST_N_Tau 4 77 - -
Lja5g1082 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 218 IPR045073 -
Lja5g1082 226 SFLD Main.3: Omega- and Tau-like 1 222 IPR045073 -
Lja5g1082 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Lja5g1082 226 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Lja5g1082 226 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 218 - -
Lja5g1082 226 Gene3D - 83 224 - -
Lja5g1082 226 SFLD Glutathione Transferase (cytosolic) 1 222 IPR040079 -
Lja5g1082 226 Gene3D Glutaredoxin 1 82 - -
Lja5g1082 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 221 IPR010987 -
Lja5g1082 226 CDD GST_C_Tau 87 216 IPR045074 GO:0004364|GO:0006749
Lja5g1082 226 SUPERFAMILY GST C-terminal domain-like 75 219 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1082 Lja-Chr5 10857174 10858155 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1082 3 219 Glutathione S-transferase Gene Family AT2G29460 40.826 7.21e-57 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1082 K00799 - gmx:547584 296.975