Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1081 ATGACAGATTTGAAAGTTCATGGATTTTGGTATAGTCCTTTTACTTTTAGGGTGTTGTGGACCCTAAAGGTGAAGGGTATATCATATGAGTACATTGAGGAAGATAGCTTCAACAAGAGCCTTCAACTTTTTCAATACAACCCAGAGCACAAGAAGACTCCTTTGTTCATTATTCATGCTGGAAAACCAATATGTGAGTCCATCATTGTAGAATACATTGATGAGTTATGGCCACATAATCCACTAGTTCCTGAAGATCCCTATGAGAAAGCTATGACACAGTTTTGGGTTACATATATCGATGACATGATTATGAAGGACATGTGGGGGCGATTTAGAGGGATTGAGGATCAGTGTTTGGGTGATGACAAGAAATTCCTTGGAGGTGAAACTTTTAACATTGCGGACATAGCTTTTGGGTCATTTGTGAAATTTCTTGTGGCTGTGGGAGATGTGTTTGATGTGAAGATCCTAGAAGCAGAGAGATTCCCTTGTTTACATACATGGTTTACTAATTTCATGGATGTTCCTGTTATCAGATACAACACTCCTGAGCATGAGAAATTGGTGGCTTGTTTGAAGTCTCTGAGAGAACAATTTTTGGAATCTTCCAGAAAATGA 621 0.3865 MTDLKVHGFWYSPFTFRVLWTLKVKGISYEYIEEDSFNKSLQLFQYNPEHKKTPLFIIHAGKPICESIIVEYIDELWPHNPLVPEDPYEKAMTQFWVTYIDDMIMKDMWGRFRGIEDQCLGDDKKFLGGETFNIADIAFGSFVKFLVAVGDVFDVKILEAERFPCLHTWFTNFMDVPVIRYNTPEHEKLVACLKSLREQFLESSRK* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1081 206 CDD GST_N_Tau 4 77 - -
Lja5g1081 206 Gene3D Glutaredoxin 1 82 - -
Lja5g1081 206 Pfam Glutathione S-transferase, C-terminal domain 117 170 - -
Lja5g1081 206 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 104 IPR045073 -
Lja5g1081 206 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 105 199 IPR045073 -
Lja5g1081 206 CDD GST_C_Tau 87 194 IPR045074 GO:0004364|GO:0006749
Lja5g1081 206 SUPERFAMILY GST C-terminal domain-like 75 198 IPR036282 -
Lja5g1081 206 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Lja5g1081 206 Gene3D - 115 204 - -
Lja5g1081 206 Gene3D - 83 114 - -
Lja5g1081 206 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Lja5g1081 206 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 104 - -
Lja5g1081 206 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 105 199 - -
Lja5g1081 206 SUPERFAMILY Thioredoxin-like 3 104 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1081 Lja-Chr5 10855968 10856779 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1081 3 200 Glutathione S-transferase Gene Family AT2G29460 35.780 3.84e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1081 K00799 - gmx:547584 250.366