Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1080 ATGGCAGATTTGAAACTCCATGGATTTTGGTATAGTCCTTTTACTTTCAGGGTGCTATGGACCCTAAAGCTGAAGGGTATACCATATGAGTACAAAGATGAAGATCGCTTCAACAAGAGTCCTCAACTTCTTGAATACAACCCAGTGCACAAGAAGGTTCCTGTGTTTGTTCATGATGGAAAACCAATATGTGAGTCCATGATCATTATTGAATACATTAATGAGTTATGGCCTCAAAATTCACTAGTTCCTGCTGATCCATATGAGAAAGCTGTGGCACGGTTTTGGGTTGCATATATTGATGACATGTTTTCTGCAGTTGTACGACCACTCTATCGTAGCAATGGCAGTGAAGAGCGCGGGGAGATTATAAAGGACATGTGGGGGCGATTCAGAGTTATTGAGGATCAGTGTTTGGGTGATCACAAGAAATTCCTTGGAGGAGACACTTTTAACATTGTGGACATAGCTTTTGGGTCATTTGTGAAATTTCTTGTGGCAGTGGGAGATGTGGTTGAAGTGGAGATCTTAGAAGCTGAGAGATTCCCTCGTTTGCATATGTGGTTTAATAATTTCATGGATGTTCCTGCCATCAGAGACAACACCCCTGACCATGAGAAATTGGTGGCTTGTTTGAAGTCTCTGAAAGAACAAAAAGAACAAATTTTGGCATCTTCCAGAAAATGA 687 0.4105 MADLKLHGFWYSPFTFRVLWTLKLKGIPYEYKDEDRFNKSPQLLEYNPVHKKVPVFVHDGKPICESMIIIEYINELWPQNSLVPADPYEKAVARFWVAYIDDMFSAVVRPLYRSNGSEERGEIIKDMWGRFRVIEDQCLGDHKKFLGGDTFNIVDIAFGSFVKFLVAVGDVVEVEILEAERFPRLHMWFNNFMDVPAIRDNTPDHEKLVACLKSLKEQKEQILASSRK* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1080 228 Gene3D Glutaredoxin 1 82 - -
Lja5g1080 228 CDD GST_N_Tau 4 77 - -
Lja5g1080 228 CDD GST_C_Tau 87 213 IPR045074 GO:0004364|GO:0006749
Lja5g1080 228 Gene3D - 83 222 - -
Lja5g1080 228 SUPERFAMILY Thioredoxin-like 3 104 IPR036249 -
Lja5g1080 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 218 IPR045073 -
Lja5g1080 228 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Lja5g1080 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 222 IPR010987 -
Lja5g1080 228 SFLD Glutathione Transferase (cytosolic) 1 219 IPR040079 -
Lja5g1080 228 SFLD Main.3: Omega- and Tau-like 1 219 IPR045073 -
Lja5g1080 228 Pfam Glutathione S-transferase, C-terminal domain 131 189 - -
Lja5g1080 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Lja5g1080 228 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 218 - -
Lja5g1080 228 SUPERFAMILY GST C-terminal domain-like 75 216 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1080 Lja-Chr5 10852992 10854276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1080 4 215 Glutathione S-transferase Gene Family AT3G09270 43.721 4.52e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1080 K00799 - gmx:547584 298.901