Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1079 ATGGCAGATTTGAAAGTCCATGGATTTTGGTATAGTCCTTTTACTTTCAGGGTGCTATGGACCTTAAAGCTAAAGGGTATAGCATTTGAGTACTTTGAGGAAGATCGCTACAACAAGAGTCCTCAACTTCTCCAATACAATCCAGTCCATAAGAAGACTCCAGTGCTTGTTCATGATGGAAAACCCTTATGTGAATCCATGATCATTGTTGAATACATTGATGAGTTATGGCCTCAGAACCCACTGGTTCCTTCTGATCCTTATGAGAAAGCTGTGGCCCGGTTTTGGGTTAGATACGTCGACGACATGATGTCTCCAGTTTTGCCACAATTCTTCGGTAGATTTGGTAGTGAAGAACAAGACAAGGTTATAAAGGATATATGGGAACGATTTGAAGTCATTGAAGATCAGTATTTGGGTGATCACAAGAAATTCCTTGGTGGTGACACTTTGAACATTGTGGACATAACTTTTGGGTCTTTTATGAAAACTCTTGTGGGTATGCAAGATGCGCTTGAAGTGAAAATCCTGGTAGCTGAGAAATTCCCTCGCTTGCATGCATGGTTTAACAATTTCATGGATGTTCCTGTTATCAACAACAACCCTGAGCATGAGAAATTGGTGGCTGCTATGAAAGTTTTCAGGGAAAAACTCTCGGCATCTTCCAGAGAATGA 675 0.4089 MADLKVHGFWYSPFTFRVLWTLKLKGIAFEYFEEDRYNKSPQLLQYNPVHKKTPVLVHDGKPLCESMIIVEYIDELWPQNPLVPSDPYEKAVARFWVRYVDDMMSPVLPQFFGRFGSEEQDKVIKDIWERFEVIEDQYLGDHKKFLGGDTLNIVDITFGSFMKTLVGMQDALEVKILVAEKFPRLHAWFNNFMDVPVINNNPEHEKLVAAMKVFREKLSASSRE* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1079 224 SFLD Glutathione Transferase (cytosolic) 1 222 IPR040079 -
Lja5g1079 224 CDD GST_N_Tau 4 77 - -
Lja5g1079 224 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Lja5g1079 224 SUPERFAMILY Thioredoxin-like 3 104 IPR036249 -
Lja5g1079 224 Gene3D Glutaredoxin 1 82 - -
Lja5g1079 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Lja5g1079 224 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Lja5g1079 224 Pfam Glutathione S-transferase, C-terminal domain 103 194 IPR004046 -
Lja5g1079 224 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 217 - -
Lja5g1079 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Lja5g1079 224 PRINTS Omega-class glutathione S-transferase signature 2 17 IPR005442 GO:0004364|GO:0005737
Lja5g1079 224 PRINTS Omega-class glutathione S-transferase signature 77 91 IPR005442 GO:0004364|GO:0005737
Lja5g1079 224 PRINTS Omega-class glutathione S-transferase signature 145 164 IPR005442 GO:0004364|GO:0005737
Lja5g1079 224 CDD GST_C_Tau 87 214 IPR045074 GO:0004364|GO:0006749
Lja5g1079 224 SFLD Main.3: Omega- and Tau-like 1 222 IPR045073 -
Lja5g1079 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 217 IPR045073 -
Lja5g1079 224 Gene3D - 83 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1079 Lja-Chr5 10849929 10850816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1079 3 222 Glutathione S-transferase Gene Family AT2G29420 40.991 4.75e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1079 K00799 - gmx:547584 290.812