Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1078 ATGGCAGATTTGAAAGTCCATGGATTTTGGTACAGTCCTTTTACTTTCAGGGTGCTATGGACCCTAAAGCTGAAGGGCATATCATATGAGTACATAGAGGAAGATCGCTACAACTTGAGTCCACAACTTCTTCAATACAACCCGGTGCACAAGAAGACTCCGGTGCTTGTTCATGCTGGAAAACCAATATGTGAATCCATGATCATTGTTGAGTACATTGATGAGTTATGGTCTCAAAACCCACTAGTTCCTGCTGATTCCTATGAGAAAGCTGTGGCCCGGTTTTGGGTTCGATACGCCGATGACATGATTTCAGCAGTTTTGCCACCATTCTTCGGTAGATTTGGCAGTGAAGAACAAGAGAAGGTTATAAAGGACATATGGGAACGATTTGGAGTCATTGAAGATCAGTGTTTGGGTGATCACAAGAAATTCCTTGGTGGCGACACTTTGAACATTGTGGACATAGCTTTTGGGTCTTTAATGAGAACTCTTCTGAGAAATTCCCTCGCTTGCATGCATGGTTTAACAATTTCATGGATGTTCCTGTTATCAACAACAACCCTGAGCATGAGAAATTGGTGGCTGCTATTAAAGTTTTCAGGGAAAAAACCTTGGCATCTTCCAGAGAATGATATACAAAAGCATTTAGCCATCTCATATATGTATTTGGGTAATTTCTTGTTGTACTTCTGA 696 0.4109 MADLKVHGFWYSPFTFRVLWTLKLKGISYEYIEEDRYNLSPQLLQYNPVHKKTPVLVHAGKPICESMIIVEYIDELWSQNPLVPADSYEKAVARFWVRYADDMISAVLPPFFGRFGSEEQEKVIKDIWERFGVIEDQCLGDHKKFLGGDTLNIVDIAFGSLMRTLLRNSLACMHGLTISWMFLLSTTTLSMRNWWLLLKFSGKKPWHLPENDIQKHLAISYMYLGNFLLYF* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1078 231 CDD GST_N_Tau 4 77 - -
Lja5g1078 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Lja5g1078 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 165 IPR045073 -
Lja5g1078 231 SFLD Main.3: Omega- and Tau-like 1 165 IPR045073 -
Lja5g1078 231 SFLD Main (cytGST) 1 165 - -
Lja5g1078 231 Gene3D - 83 178 - -
Lja5g1078 231 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Lja5g1078 231 CDD GST_C_Tau 88 161 IPR045074 GO:0004364|GO:0006749
Lja5g1078 231 Gene3D Glutaredoxin 1 82 - -
Lja5g1078 231 SUPERFAMILY Thioredoxin-like 3 103 IPR036249 -
Lja5g1078 231 SUPERFAMILY GST C-terminal domain-like 75 165 IPR036282 -
Lja5g1078 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 217 IPR010987 -
Lja5g1078 231 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1078 Lja-Chr5 10846315 10847300 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1078 3 157 Glutathione S-transferase Gene Family AT2G29420 45.806 1.14e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1078 K00799 - gmx:547584 237.654