Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1068 ATGCCAAGCTTTCCTGTTGCAGCTTGTGGAACATCAAGCACAGATCAACCAAACCATGAAGATGCTTGTGTGCATTTATCTACAGAAGAGAAGCTTGCTGCAGAAGAGAGTCTTACAGTTTATTGCATGCCTGTAGCATTCTACAACAATCTTAGACTACGTGCAATAGAAAATCCATTATTTCTTCAGAGATGTCTACTCTACAAGAGAGAGGCCAAGCACAATAAAAGAATAGAAATGACAGTTTCACTATCACAGAGTGATGAAGTAAAAAAGACCTTTCTTCCTTTATATCTCGGTCTTGCAAGGCGGGATAGTAATAATGAAGATGCACAGAACAAAAAGTATTCTTCTGTTCATCACGTCAGTAAGATATTCACCTTTCGGGATTCCTCTAGCAATGATGGGAGCGCCCAAATCCAAGCAAACTTTACGCTCCCTGCAATTAATAAGTTAGCTGAGAAGGCTAGATCTGGCTCTATAGATATCTTGCTTTTCACCAATGTGGGAAACCCAAATTCATCATCTGGGGTCAATTCAAGCGTGGTGCCTTCTGATCCAATTTCTAGCGAAACAAGTGATGAGCAACACTGCTTAGGCGGGACATTATCTTTAGAATTTCTTTATGCATGTTGGGATAGTCTTTCAAATTTTAGTCTGGGAGAGCGAGTTGAAATTATGCCTACTGTTGATTTGCTTCCATGTGTTGTGAAGCGTGATTTTCTATCTGCACACTGGACCATCTCAATGCAAGATCACTGCAGTTTTGGGAAAGAGAGTACATCAAAGAAGGTCCAACTCACAATTTCTGCGGAAGACTTTGGGGCTAAGTTGAAAGCTCCCTACTTTAGCTATGCAAGCAGTTCTGTGTGGTGGTCATCATATATGTCGCGCCTCATTCGGTTGAGGGAAGGACAGGTCATGTTTAATTACAGGTATTACCATAATAAGTTGCAGATAACTGAAGCCACTGAAAATTTTGTCTGTCCATTCTGCTTGGTTAGTTGTGCAAGCTATAAGGGTCTAAGAGATCACTTGCCCGCATCTCATGATCTTTTCAACTTTGAATTTTTGGGACCGGAGGATTTTCAGGCTGTGAATGTGTCTTTGAAATCTGATAGCTGGAGATTTGGGATTGTTGCAGAAGGTATTAATCCAAAATTACAAACTTTTTTCTATTGTGGCAAGACATTTAAGCGTAGAGGTTCAGAGAATGCATCTTTTGAAAATGCAAATTATGTGGACCCTCTGGTCTTGGAGTCTGAAATTCCAGCAAGAGATACTGATGAGCCTTTGGAGAACGCTGATGTCCCATCAATACCCAAGTACGAAGTACCATCAATACCCGAGTACGAAGTCCCATCAATACCTGAGCACGATCCTGGGACTCCTGCAGCGTTACAGGTTTCCAAGAAAGGGAAGTTACCTGTTGAGCCTTCTGACTCACGAAGCCTTGGACGGTTGATGGATCGACCGTTTTTTCACTCTCACAAAGCCCAGCCAATGGATATTGGAGTGGTTCTAGCGGATGAAGATAGTGAGGATGAGGTCGAAGATGATGTTAGAGACGCTGAAGGGCAAAAAATGTTAGATAATTTTGATCTAAGCACAGAGGAGAAGACATTCATGCAAATGTGGAACACATTTGTTCGGCAGCAAAAGGTGCGGGCAGACGGTCACATTCCGTGGGCATACGAGGCTTTCTCAAAATCCAATGCTGACAAGCTTGTTCAATCCCCGAAATTAGAATGGCGTTGGAGATTGTTTATGATCAAACTGTGGAATCATGGTCTTCTAGATGGACAGACCATGAATAAATGTAGTATTATTCTTGAAGAATACAGGAAGCAGAATTCAGACCCCAAAAGCTAA 1872 0.4188 MPSFPVAACGTSSTDQPNHEDACVHLSTEEKLAAEESLTVYCMPVAFYNNLRLRAIENPLFLQRCLLYKREAKHNKRIEMTVSLSQSDEVKKTFLPLYLGLARRDSNNEDAQNKKYSSVHHVSKIFTFRDSSSNDGSAQIQANFTLPAINKLAEKARSGSIDILLFTNVGNPNSSSGVNSSVVPSDPISSETSDEQHCLGGTLSLEFLYACWDSLSNFSLGERVEIMPTVDLLPCVVKRDFLSAHWTISMQDHCSFGKESTSKKVQLTISAEDFGAKLKAPYFSYASSSVWWSSYMSRLIRLREGQVMFNYRYYHNKLQITEATENFVCPFCLVSCASYKGLRDHLPASHDLFNFEFLGPEDFQAVNVSLKSDSWRFGIVAEGINPKLQTFFYCGKTFKRRGSENASFENANYVDPLVLESEIPARDTDEPLENADVPSIPKYEVPSIPEYEVPSIPEHDPGTPAALQVSKKGKLPVEPSDSRSLGRLMDRPFFHSHKAQPMDIGVVLADEDSEDEVEDDVRDAEGQKMLDNFDLSTEEKTFMQMWNTFVRQQKVRADGHIPWAYEAFSKSNADKLVQSPKLEWRWRLFMIKLWNHGLLDGQTMNKCSIILEEYRKQNSDPKS* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1068 623 PANTHER POLYCOMB GROUP PROTEIN 19 622 - -
Lja5g1068 623 MobiDBLite consensus disorder prediction 460 482 - -
Lja5g1068 623 Pfam VEFS-Box of polycomb protein 475 609 IPR019135 -
Lja5g1068 623 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 19 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1068 Lja-Chr5 10776008 10790093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1068 1 613 C2H2 Transcription Factor Family AT5G51230 44.288 1.82e-152 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1068 - - gmx:100798991 582.022