Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1045 ATGGGAATTGCAGTGGGAGCTGTTGATTTGCTCAGTGAAAAAGCAGCCATCATGAGAGAGTCCTTGCAGAAGAGCCAAACCATCACAGACAACGTTGTCACCATCCTCGGTTCCTTTGACCACCGTCTCTCTGCTCTTGAAACCGCCATGCGTCCAACCCAGATTAGAACTCATTCCATTAGGAAAGCTCATGAGAATATTGACAAGACTTTGAAGGCTGCTGAGGTTATATTGGCTCACTTTGATCAATATCGCCAGGCAGAGACCACAATACTTAAAGGGCCACATGAAGACCTGGAAAACTATCTTGAAGCAATTGCTACGTTGAGAAGCAACATCAAATTTTTTGGCAGTAAGAAGAGTTTTAAGAGCAGTGATGCTGTTGCCAGCCATGCTAATAGTTTGCTAGCTAAAGCTGTTGCTAAACTAGAGGATGAGTTTAAGCAGTTATTATTATCTTACAGCAAACCCGTGGAACCTGAGCGCCTCTTTGATTGCCTCCCAAACTCAATGCGGCCTTCGTCAGGGTCACCTGGCCATGAGGGTGATCCTAGTGCCAAGAATCCTTCTAATCACCATTCTCATTCTGAAAATAATGCTGATGCTGTTGTATACACGCCTCCTGCTCTTATACCACCAAGAATTTTGCCATTGCTACATGATTTAGCTCAGCAAATGATTGAAGCTGGTCATCGACAACAGTTACTCAAAATATACAAAGATGCCCGTTCTAATGTATTGGAAGAAAGCCTCCAAAAACTTGGAGTTGAGAAACTCAACAAAGATGATGTTCAAAAGCTACAATGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATTCACTTCATGCGAATAGCAGTGAAATTGCTATTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTCGATGCACTCAGTGAACAGTGTTTTGCAGAGGTTACTACAAACAGTGTCTCTATGCTACTTAGCTTCGGAGAAGCAATAGCCAAAAGCAAGAGATCCCCAGAAAAGTTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAGCTCCACTCCGAGATTGAAACCCTTTTTAAAGGTATAGCTTGCACTGAAATAAAAGATGCTGCAATGAGTTTGACAAAACGACTTGCACAAACTGCCCAAGAAACCTTTGGAGATTTTGAGGAAGCAGTTGAGAAAGATGCTACAAAGACTGCAGTTACAGATGGAACTGTCCATCCTTTGACAAGCTATGTTATTAACTACGTGAAGTTTTTATTTGACTACCGGTCCACCTTGAAGCAACTCTTCCAAGAAATTGAAGGCGGAGATGATTCTTCCCAGCTAGCATCGGTAACAATGAGAATAATGCAAGCTTTGCAAATCAATCTAGATGGTAAATCAAAGCAGTATAGAGACCAGGCATTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTCGGAGGTCTGAAGCGAAGGATTTGCTAGGGGATGATTGGGTACAACGGCACAGAAGGGTTGTGCAACAGCATGCTAATCAATACAAAAGAAATGCTTGGGCGAAGATTCTTCAGTGCCTATCTATTCAGGGCCTTACCTCATCAGGTGGTGGGAGTGGTGCTGGTGGTGGTGATGGTGGTGGAACTGGAAATAGTAGCGGTGCTTCTAGAGCAATTGTTAAAGACAAGCTAAAGCAATTCAATGTCATGTTTGAGGAACTCCATCAGAAACAATCTCAGTGGACAGTTCCCGACTCCGAGTTACGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGTTGCCCGCATATAGGTCATTTGTGAAACGTTTTGGGGCGCTAGTGGAGACAGGAAAGAATCCTCAGAAGTACATCAAATACACAGCTGATGATCTAGATCGAATGTTGGGAGAATTTTTTGAAGGAAAAAACATGAGCGAAACGAAGCGGTAA 1962 0.4241 MGIAVGAVDLLSEKAAIMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEVILAHFDQYRQAETTILKGPHEDLENYLEAIATLRSNIKFFGSKKSFKSSDAVASHANSLLAKAVAKLEDEFKQLLLSYSKPVEPERLFDCLPNSMRPSSGSPGHEGDPSAKNPSNHHSHSENNADAVVYTPPALIPPRILPLLHDLAQQMIEAGHRQQLLKIYKDARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDALSEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGIACTEIKDAAMSLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEIEGGDDSSQLASVTMRIMQALQINLDGKSKQYRDQALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGAGGGDGGGTGNSSGASRAIVKDKLKQFNVMFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGALVETGKNPQKYIKYTADDLDRMLGEFFEGKNMSETKR* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1045 653 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 649 IPR004140 GO:0000145|GO:0006887
Lja5g1045 653 SUPERFAMILY Cullin repeat-like 77 644 IPR016159 -
Lja5g1045 653 MobiDBLite consensus disorder prediction 165 198 - -
Lja5g1045 653 Gene3D Exocyst complex component Exo70 185 653 - -
Lja5g1045 653 Gene3D Exocyst complex component Exo70 75 179 - -
Lja5g1045 653 Pfam Exo70 exocyst complex subunit 278 640 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lja5g1045 653 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1045 Lja-Chr5 10596522 10610965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1045 8 653 EXO70 exocyst subunit family AT5G03540 74.146 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1045 K07195 - gmx:100813987 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1045 5 10596522 10610965 Lja5g1045 5 10596522 10610965 ECH