Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1032 ATGTCAGGATCAGAGGAAGTTTGGTCATCATCCATTGAAGAAGAATCTGGTCAATCTCTCCCTCCATTTGATAACAGCAGTGGCTACAATTCAAGAACAGGCATTTATCACTCTCTAGTTAGCCTTGGCACCAAGCATGAAATCCCAACAAATCCTAACCTCAACACTGCCAATCTTGTGCTATCACACTTCCCACATGCAGACCTTGCTGATGCAAGAATTGCATTCATTGACTCAGCTACTGATCAGAGAGTAAGCTACGGCGAGCTTCGCCGCTCTATTTATTCCCTTGCATCAGCTTTGTTCCATGGACTTGAGGTTAAGAAAGGGGATGTAGTGTTTGTTTTGTCCCCAAACTCAATCTTGTATTCAACCATATGTTTAGCAGTGTTATCAGTTGGAGCAATTCTCACCACTGCCAACCCCCTCAACACTGAGTCAGAAATTGCCAAGCAAGTGCATGATTCAGGTGCTAAACTAGCCATCTCAGCACCAGAAGAGCTTCACAAATTAGTCCGAAGCGGGGTACCGACAATTATCACCTCTCGTCCATCTGATAAGAACATGTTATCAGTTGAAGAGTTAATAGAAGGTTGCTATGATTCACCTGAGTTGTTTCCGCATGTTCTTGTGGCACAATCAGACACTGCTGCTATACTTTACTCTTCCGGGACAACCGGTGTAAGCAAAGGTGTGGTTTTGACTCATGCAAATCTCATTTCCATAATGAAACTACTCTCATGGTCTGCTGATGTATCTGCATCACAAGATGATGTTTTCTTGGCCTTCATTCCAATGTTCCACATCTATGGACTAGTATTCTTTGGATTGGGATTGTTGTCTGTTGGTGTTACAACAATTCTGATGCAGAAATTTGACTTCCAAGCTATGATCATTGCAATCCAGAAGTACAAAGTTAATAACTTACCAGCAGTGCCACCAGTGATCCATGGACTAGTGAAATCTGCAAGCAAAATTGGGTGTGCCTTGTCAAGTTTGAGAAGGGTGGGTTCAGGGGCTGCACCTCTGAGTAAGGAAATGGCACAGGAGTTCAGAAAGGTGTTTCCTTGGATGGAGCTAAGGCAAGGTTATGGGCTAACAGAAAGTTGTGGTGCAACATCATTTTTTGTATCAGACAAAGATGCTAAAGCTCATTTAGGATCATGTGGGAAGCTGATTCCAACTTTTTGTGCAAAAGTTGTGGACACTGAAACAGGAAAGCCTTTGCCTCCTCTTAAGGAAGGAGAGTTATGGCTGAAAAGTCCTACTATCATGAAAGGGTATCTAGGAAATGTGGAGGCGACAACTGCAACAGTTGATTCAGAAGGTTGGTTGAGGAGTGGTGATCTTGGTTATATTGATGAGAATGGATTTGTTCATGTGGTTGAACGAATCAAGGAGCTAATCAAACACAAAGGGTATCAGGTGGCTCCAGCAGAACTTGAATCTTTGCTGCTAAGTCATCCACTTATTGTTGATGCAGCAGTTATACCGGTTGAAGATGAAGAAACTGGACAGATACCAATGGCATATGTGGTGAAAGCAGCTGGTTCTGAACTCTCAGAAGACCAAGTCATTCAATTTGTTGCTGGCCAGGTTGCTCCATATAAGAAAGTGAGAAGGGTGAGTTTCATTGACACTATTCCAAGGTCAACTGCTGGAAAGATATTGCGCAAGAATCTTGTTTCTCAAAACAAAAATCAACTTGTCTCCAAGTTATGA 1722 0.4262 MSGSEEVWSSSIEEESGQSLPPFDNSSGYNSRTGIYHSLVSLGTKHEIPTNPNLNTANLVLSHFPHADLADARIAFIDSATDQRVSYGELRRSIYSLASALFHGLEVKKGDVVFVLSPNSILYSTICLAVLSVGAILTTANPLNTESEIAKQVHDSGAKLAISAPEELHKLVRSGVPTIITSRPSDKNMLSVEELIEGCYDSPELFPHVLVAQSDTAAILYSSGTTGVSKGVVLTHANLISIMKLLSWSADVSASQDDVFLAFIPMFHIYGLVFFGLGLLSVGVTTILMQKFDFQAMIIAIQKYKVNNLPAVPPVIHGLVKSASKIGCALSSLRRVGSGAAPLSKEMAQEFRKVFPWMELRQGYGLTESCGATSFFVSDKDAKAHLGSCGKLIPTFCAKVVDTETGKPLPPLKEGELWLKSPTIMKGYLGNVEATTATVDSEGWLRSGDLGYIDENGFVHVVERIKELIKHKGYQVAPAELESLLLSHPLIVDAAVIPVEDEETGQIPMAYVVKAAGSELSEDQVIQFVAGQVAPYKKVRRVSFIDTIPRSTAGKILRKNLVSQNKNQLVSKL* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1032 573 SUPERFAMILY Acetyl-CoA synthetase-like 65 567 - -
Lja5g1032 573 Gene3D - 467 570 IPR045851 -
Lja5g1032 573 Pfam AMP-binding enzyme C-terminal domain 480 555 IPR025110 -
Lja5g1032 573 MobiDBLite consensus disorder prediction 1 26 - -
Lja5g1032 573 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 21 572 - -
Lja5g1032 573 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 572 - -
Lja5g1032 573 CDD 4CL 48 561 - -
Lja5g1032 573 Pfam AMP-binding enzyme 72 470 IPR000873 -
Lja5g1032 573 ProSitePatterns Putative AMP-binding domain signature. 219 230 IPR020845 -
Lja5g1032 573 Gene3D - 44 466 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1032 Lja-Chr5 10462422 10464717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1032 21 573 Monolignol Biosynthesis Gene Families AT4G19010 43.339 2.76e-151 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1032 K10526 - gmx:100783104 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1032 5 10462422 10464717 Lja5g1032 5 10462422 10464717 ECH