Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1030 ATGGCTTCCCCTTTCCCTTTACCAATCCTCTTCCTCCTCTTCCTCTCCATCCCTTTCTCCTCCGCCAAGCTCAACGTGGACTACTACAAGAAAACATGCCCTGACTTCAACAGAATCGTCACTGAACAAGTCTTCAACAAACAAAGCACCAGCCCCACCACCGCCCCTGGCATCCTCCGCCTCTTCTTCCATGACTGTATCTCCGGCGGCTGTGACGCTTCCCTTCTCGTCACCTCCACCGCCTACAACCCCCATGCAGAGAGAGACTCTGAGTCTAACCTCTCCCTCTCCGGTGACGCCTTCGACATTATCCAGAAAATCAAGAATGCTCTGGAGCTAGCATGCCCTGGTGTTGTGTCCTGCTCTGACATTATAGCTCAGGCCACAAGGGACCTTGTGAAAATGGTGGGTGGACCCTATTACAATGTGAGGCTTGGGAGGAAGGATAGCCTTATCTCTGATGGTTCAAGAATTGAATCAAATCTTCCAAACCAGTACATGAACATGGATCAGATCATCGAAAAGTTCACCTCAAAGGGTTTGACTATCAAAGAGATGGTGGCTCTCACTGGTGCACACACCATTGGTTTCACTCACTGCAAGGAATTCAGCAACAGGATCTTCAACTTCAGCAAGACCACTGAGGTTGACCCTACCATGCACCCAAAGCTTGCTGCAGGGTTGAGGAAGATTTGCCAGAATTACACCCATGACCCTACAATGGCAGCATTCAATGATGTGAGGTCACCAGGGAAATTCGACAATGCATTCTTCCAGAATGTGCTCAAAGGGGTGGTGCTAATGTCCTCTGATGCTATTCTTGCTTCGGACCCAAGGACAAGGCCAATTGTGGAGCTCTATGCAAAAGATGAGCAAGCATTCTTCCATGACTTTGCAAAAGCAATGGAGAAGCTTTCTGTGCATGGTGTGAAGACTGGGAAGAAAGGAGAAGTGAGGAGTAGGTGTGACCAGTTCAACCACATTCCTGCTTCTGCATAG 999 0.4905 MASPFPLPILFLLFLSIPFSSAKLNVDYYKKTCPDFNRIVTEQVFNKQSTSPTTAPGILRLFFHDCISGGCDASLLVTSTAYNPHAERDSESNLSLSGDAFDIIQKIKNALELACPGVVSCSDIIAQATRDLVKMVGGPYYNVRLGRKDSLISDGSRIESNLPNQYMNMDQIIEKFTSKGLTIKEMVALTGAHTIGFTHCKEFSNRIFNFSKTTEVDPTMHPKLAAGLRKICQNYTHDPTMAAFNDVRSPGKFDNAFFQNVLKGVVLMSSDAILASDPRTRPIVELYAKDEQAFFHDFAKAMEKLSVHGVKTGKKGEVRSRCDQFNHIPASA* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1030 332 Gene3D Peroxidase, domain 2 163 305 - -
Lja5g1030 332 ProSiteProfiles Plant heme peroxidase family profile. 23 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Lja5g1030 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Lja5g1030 332 Gene3D - 27 326 - -
Lja5g1030 332 PANTHER - 9 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 CDD secretory_peroxidase 23 325 IPR033905 GO:0004601|GO:0042744
Lja5g1030 332 SUPERFAMILY Heme-dependent peroxidases 24 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PANTHER PEROXIDASE 41 9 328 - -
Lja5g1030 332 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1030 332 Pfam Peroxidase 44 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1030 Lja-Chr5 10450497 10452155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1030 10 326 Peroxidase AT1G24110 58.176 1.77e-129 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1030 K00430 - gmx:100795676 515.768