Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0999 ATGCTGGTGTATGAATACATGTCTAACAAAAGCCTGGATTCATTTATTTTTGATTCGGTTCAAAGTAAATTGTTAGATTGGTGTATGCGCTTTAACATCTTGTATGGAATTGCTCGAGGGCTTCTTTATCTTCATGAAGATTCTAGATTAAGGATCATACATAGAGATCTTAAAGCAAGTAATATTTTATTAGACAATTATATGAATCCAAAAATTTCGGATTTTGGCATGGCTAGAATCTGTGGAGGTGATCAAATTGAAGGCACAACAAATAGAATAGTTGGGACATAG 291 0.3333 MLVYEYMSNKSLDSFIFDSVQSKLLDWCMRFNILYGIARGLLYLHEDSRLRIIHRDLKASNILLDNYMNPKISDFGMARICGGDQIEGTTNRIVGT* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0999 96 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Lja5g0999 96 Pfam Protein kinase domain 2 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0999 96 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Lja5g0999 96 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0999 96 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 96 - -
Lja5g0999 96 SUPERFAMILY Protein kinase-like (PK-like) 1 96 IPR011009 -
Lja5g0999 96 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0999 Lja-Chr5 10031412 10031829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0999 1 96 Receptor kinase-like Gene Family AT4G23140 68.750 3.88e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja5g0999 Pkinase 7.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0999 - - lja:Lj0g3v0175109.1 197.593