Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0990 ATGGATTTTGGAATCGGTGCACTCCTGCTGGTGCTGACATGCACTTTCATCTACATTCTTCACTCACTTCATGCAAGAACAAGAACCTCAAAGCTTCCACCAGGACCTTCAGTTTTCACCATGATAAAAAACGTCCAGCAAATCCTCAAAAGCCCACAACAGTGGATGGCAAAGCTCGCCGAGACCCACGGTCCCGTCATGCGTCTGCAGATAGCCCAAGGAAACCCCACCATCATCATCTCATCCCCCGAATTGGCCAAAGAAATCCTCCACATCAATGACATCCTATTCTCCGACCGGTCGATCCCCGATGTCACGACCGCCCACAACCACAACCACTCTAGCCTTGTCTTCCTCCCGGTCTCGCCGCTCTGGCAAGACCTGAGGAAGATCTGCCACCACAAGCTCTTTGCCAACAAGACTCTCGACGCGAGCCAAGACCTCCGACGCCAGAAGCTTCTGGAACTCATGAGCGACATGCGCCAGAGCAGCGCCGGAGGCGAGGTGGTTGACATTGGAAGAGCGGCGTTCAAGACGTGCATTAATTTCCTGTCTAACACTTTTGTGTCTCAGGATTTCGTTAGGAATTTGGATGATGAGTACAAGGATATTGTGGCAACTTTGTTGAAAGCAACTGGGACACCGAATGTGTCGGATTTTGTCCCTGCGCTGAAGATGTTTGATCCACAAGGGGTGAGAAAGCACACTGCTAATTATCTTACCAAGTTTTTTGCTATCTTGGATCGGTTGATTGAGGAACGTTCTAAGGTGAGGAAAGAAAAAGGTTATGTTACTAACAATGACATGTTGGACACCCTGTTGGATATTGCTGATGAGGATAGCCAAAAGATGGATAACAAGAAGATTAGACATTTATTACTGGATCTGCTTGTGGCTGGAACAGATACAACTGCATATGGATTAGAAAGAGCAATGGCTGAAGTAATCCACAATCCAAGTGTGATGTCAAAAGCCAAAAAGGAACTTGAGGAGGTCATTGGAAAAGGTAATCCAGTTGAGGAATCAGACATAGGAAGACTACCATACTTACAAGCAGTGATCAAAGAAAGTCTACGTAAACACCCTCCAGCTCCAGTTTTACTCCCTCGAAGGGCCAAGAAAGATGTGGAAATCGGAGGCTACACGATCCCAAAAGGTGCTCAAGTTCTTATCAATGAATGGGCTATTGGTAGAAACCCAAAAGTGTGGGATAAGCCCAATTTGTTTTCACCTGAAAGATTTGAGGGATCTGAACTTGATGTGAAAGGTAGACATTTTCAGCTTACACCATTTGGTAGTGGGAGACGTATATGCCCTGGGTCTCCTCTAGCTGTTAGAATGTTGCACTTGATGTTGGGATCATTGATCAACTCTTTTGATTGGAAGCTTGAAAACAATATGGAGCCAAAGGATATGGACTTGGATAAATCCCTGCGAGCCATTCCAATTATGGTAAACTGTTAA 1464 0.4583 MDFGIGALLLVLTCTFIYILHSLHARTRTSKLPPGPSVFTMIKNVQQILKSPQQWMAKLAETHGPVMRLQIAQGNPTIIISSPELAKEILHINDILFSDRSIPDVTTAHNHNHSSLVFLPVSPLWQDLRKICHHKLFANKTLDASQDLRRQKLLELMSDMRQSSAGGEVVDIGRAAFKTCINFLSNTFVSQDFVRNLDDEYKDIVATLLKATGTPNVSDFVPALKMFDPQGVRKHTANYLTKFFAILDRLIEERSKVRKEKGYVTNNDMLDTLLDIADEDSQKMDNKKIRHLLLDLLVAGTDTTAYGLERAMAEVIHNPSVMSKAKKELEEVIGKGNPVEESDIGRLPYLQAVIKESLRKHPPAPVLLPRRAKKDVEIGGYTIPKGAQVLINEWAIGRNPKVWDKPNLFSPERFEGSELDVKGRHFQLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENNMEPKDMDLDKSLRAIPIMVNC* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0990 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Lja5g0990 487 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 485 - -
Lja5g0990 487 Gene3D Cytochrome P450 19 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0990 487 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0990 487 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0990 487 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0990 487 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0990 487 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0990 487 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0990 487 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0990 487 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0990 487 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0990 487 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0990 487 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0990 487 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 485 - -
Lja5g0990 487 Pfam Cytochrome P450 33 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0990 487 SUPERFAMILY Cytochrome P450 27 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0990 Lja-Chr5 9756723 9759197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0990 1 478 Cytochrome P450 AT2G45550 43.002 2.24e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0990 - - gmx:100800810 671.389