Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0986 ATGGACGAACGGAAACACCGCACCACTAGAACAACGTCTCTCAGGGACGACTCCGAGTCCTCCACTGGTAGCTGGGACGTTCTCGAATGGACCAAGATTGAGCCAATTTCACAGTTCGCGTCGCATGAGAATCTCGATTTCTTGCTCGAGGCGGAACAAGTTGTAGCCGAAGGACATGGTGTTGTTCTTGTTAATACTGATGATGCGGGCATGTTGATGGTAACAAATTTTCGTCTTCTTTTTCTGAGTGAGGGAACTAGAAAAGTTATTGCCCTTGGAACAATACCACTAGCAACCATTGAGAAGTTCAACAAGATAGTTGTAAAAGTTCAGTCAAACACACGTCAATTAGACAAGACACCAACTCAGAGACTGCTCCAGGTGATTGGAAAAGATATGAGAATTATAGTCTTTGGTTTTAGGCCTCGTACAAAACAGAGACGTGTGATATTTGATGCACTACTGAGGTGTACAAAGTCAACGAGATTATGGGATCTCTATGCTTTTGTATCTGGACCTTCTAGGTTTAAGAACACTACTCCACAGGTGCGCTTATTGGATGAGTATTTTCGACTTCTTGGCAAAGGTTCATATCATGCATCAACCAACATGATTGAAAGTGGGTCCTACACCTTGTCAAATGACTTATGGAGAATAAGTAGTGTGAATTCCAATCATTCAATGTGCCAGACCTATCCATTTGCTTTGATTTTTCCAAAGGTCATTAGTGATGATGAAGTGCTCCAGGCTTGTAGCTTCCGTGCAAGATCTCGACTACCTGTAATTTCATGGTGTCATCCTGTTACTGGAGCAGTTCTTGCCCGCTCTTCCCAACCTTTAGTTGGTCTCATGATGAATATGAGGAGTAACATGGATGAAAAACTTGTGGCTGCACTTTGCAGTAAACTTGATGATGGCTCACGGAGAAAGCTATATATTGCTGATGCAAGACCAAGGAAAAATGCATTAGCTAATGGAGCCATGGGAGGTGGTTCAGAATCATCATCAAACTATTTTCAATCTGAGGTAGTCTTTTTTGGGATAGACAACATCCATGCAATGAGAGAGAGCTTTGTTCGGCTCCGAGAATACATGGACACTCATGGCAGAGCGTCATCAGATGGAATGTTATCTTTTTTGAGACATGGTGGGTCGACATGGGGAGGTGGCAATTTAAGTAGTATGTCTGCTTCAGTATCAACCCTTGGGGACAGTGGATGGCTATTGCATGTTCAGAATGTCTTGGCCGGTGCAGCTTGGATTGCAGCTCGTGTTCATATGGAAAAGGCTTCTGTTCTTGTACATTGCAGTGATGGATGGGATAGGACAAGCCAGTTGGTTGCACTTGCTAATTTGTTGCTTGATCCATATTATCGGACTTTGGCAGGGTTTCAGGCACTCGTTGAAAAAGACTGGCTAGCATTTGGTCATCCATTTTCCGATCGTGTGGGAATACCTTGTACCTCTGGAAGTGGTAACACACCTTTTGAGTTACCTAGGCAGCCTTCTGCTGGAAATTTCCCATCATCGCCGATGCGCCCGTCATCAGGAGCATTCTCTTCTCAACCTCCAACCTCATCTCATGCACATACCTCAAATAATTACTCTCCCATTTTTTTGCAGTGGGTTGATTGTGTTTCACAATTGTTGCGGATGTATCCTTTTGCTTTTGAGTTTTCAGCGGCTTTCCTGGTGGACTTCTTAGACTGCATGCTTTCTTGTCGCTTTGGAAACTTCTTCTTTAATAGTGAGAAGGAGAGACTGCAATACAGTGTTTATGAAACATGTGGATGTTTGTGGGTTTACTTGGCTGATTTGCGGGCATCAGACGGAGGTTCCCACGTGCATTATAATCCTTTTTATGATCCGTTGAGGAACAACGGTCCCCTTCTGCCACCAGCAGCAGCGTTAGCCCCAACTTTGTGGCCCCAATTCCACCTACGTTGGGCATGCCCGGACGAAGTACAAGCTGGGGAGGTTGAAGCACAATGTAGAAAGATAATCACGAAATCCTCTGAGATGCAGAAGGCTAAAGAAGTGGCAGAAAGGAAAGCTAAAGAAATCACAAATGCCATGGAATCATTGAATACAGAACTGCGTCGCGAGAAACTGCAAAACAGCTCAGCTTTGAACATGGCCAAGAGATTAAGCAAGGAAAATATGGCCATAAAGCGCGCAGTTCAGTCAATTGGGTGCAAGGTTCACTTCTCTGGTAACGGTGGTGACTGCATTGTTGACATTGAAAACAGCCCAGCCGAAGCAACAAACTTTTTGCATTGCTCCTCTAGGCAAGAATCAAATAATGCATTGCTTGATGACAAAAAGAATCTATCCGCTTCTCTAACAGTTACAGCAGATAATGTTGATGATGTTAATGATGATGGAAGGAATTCTATTGGTCGAATATGCGAAACGCTATGCCAATTTCGCGCTGGAGAAGGAGGTTGTAGGTGGCCAGAAGGTGAGTGTGCTCAACTATGTAGTCAATTTGTTGGTGTGAAGGCAAATTTTGATGCGCTTGACCAACTTTCGATTGATGATAGTTATTTCAATTGA 2556 0.4382 MDERKHRTTRTTSLRDDSESSTGSWDVLEWTKIEPISQFASHENLDFLLEAEQVVAEGHGVVLVNTDDAGMLMVTNFRLLFLSEGTRKVIALGTIPLATIEKFNKIVVKVQSNTRQLDKTPTQRLLQVIGKDMRIIVFGFRPRTKQRRVIFDALLRCTKSTRLWDLYAFVSGPSRFKNTTPQVRLLDEYFRLLGKGSYHASTNMIESGSYTLSNDLWRISSVNSNHSMCQTYPFALIFPKVISDDEVLQACSFRARSRLPVISWCHPVTGAVLARSSQPLVGLMMNMRSNMDEKLVAALCSKLDDGSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEVVFFGIDNIHAMRESFVRLREYMDTHGRASSDGMLSFLRHGGSTWGGGNLSSMSASVSTLGDSGWLLHVQNVLAGAAWIAARVHMEKASVLVHCSDGWDRTSQLVALANLLLDPYYRTLAGFQALVEKDWLAFGHPFSDRVGIPCTSGSGNTPFELPRQPSAGNFPSSPMRPSSGAFSSQPPTSSHAHTSNNYSPIFLQWVDCVSQLLRMYPFAFEFSAAFLVDFLDCMLSCRFGNFFFNSEKERLQYSVYETCGCLWVYLADLRASDGGSHVHYNPFYDPLRNNGPLLPPAAALAPTLWPQFHLRWACPDEVQAGEVEAQCRKIITKSSEMQKAKEVAERKAKEITNAMESLNTELRREKLQNSSALNMAKRLSKENMAIKRAVQSIGCKVHFSGNGGDCIVDIENSPAEATNFLHCSSRQESNNALLDDKKNLSASLTVTADNVDDVNDDGRNSIGRICETLCQFRAGEGGCRWPEGECAQLCSQFVGVKANFDALDQLSIDDSYFN* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0986 851 Coils Coil 671 705 - -
Lja5g0986 851 MobiDBLite consensus disorder prediction 507 531 - -
Lja5g0986 851 ProSiteProfiles Myotubularin phosphatase domain. 197 646 IPR010569 -
Lja5g0986 851 CDD PTP-MTM-like 258 548 - -
Lja5g0986 851 Gene3D - 59 158 IPR011993 -
Lja5g0986 851 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 209 650 IPR029021 -
Lja5g0986 851 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 16 850 - -
Lja5g0986 851 SMART gram2001c 37 107 IPR004182 -
Lja5g0986 851 PANTHER MYOTUBULARIN-RELATED 16 850 IPR030564 -
Lja5g0986 851 ProSitePatterns Tyrosine specific protein phosphatases active site. 434 444 IPR016130 GO:0016311|GO:0016791
Lja5g0986 851 MobiDBLite consensus disorder prediction 1 22 - -
Lja5g0986 851 Pfam Myotubularin-like phosphatase domain 178 587 IPR010569 -
Lja5g0986 851 SUPERFAMILY PH domain-like 48 170 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0986 10 851 Protein tyrosine phosphatase (PTP) family AT3G10550 67.059 0.0 1123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0986 K18081 - gmx:100781842 1375.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0986 5 9690916 9702627 Lja5g0986 5 9690916 9702627 ECH