Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0983 ATGGAGCGAGTGACTTCATCTTCCTTGCCTTCATTTCTTGTTTGGGCTATCTTTATGTTTGGTTTCGTGCTTCAGGCTTCTGGCAATGCGGAAGGTGATGCCCTCAGTGCATTGAGGAACAGCTTGAATGATCCTAACAACTTTCTTCAAAGATGGGATTCTACCCTTGTCAATCCCTGCACTTGGCCTCATGTTAAATGCAATGATGCTGACAGTGTGACCCGTATTGATCTTGGAAATGCAAACCTTTCTGGCCAACTCGTTCCGGATCTTGATAAGCTTTCAAATTTGGAGTACTTGGTACTTTATAGTAATAATATAACTGGAAAAATCCCAGATGAGCTTGGAAATTTGACAAACTTGGTGAGCTTGGATCTTTACGCGAACAATTTAACTGGTACCATACCGAATTCATTGGGCAACCTTGGAAAGCTACGTTTCCTGCGTCTCAGTAATAACAGCTTGTCTGGAGGTATTCCCGTGACATTGACAAACATTGCTTCACTGCAAGTTCTTGATCTCTCGAACAACAAGCTAAAGGGGGACATCCCGACTGAGGGTTCATTTTCATTGTTTACCCCCGTCAGCTATCAAAATAATCCTGGCTTAATTAGACCAAAATCCACTCCATCTTCTCCACTTACTCCGCCATCACAAGCTTCTTCAGGTAATAGTAATACTGGAGCTATTGCTGGAGGAGTTGCTGCTGGGGCTGCTCTGTTGTTTGCAGCACCTGCAATTGCAATTGCTTATTGGCGAAGAAGGAAACCTCAAGATCATTTCTTTGACGTTCCTGCTGAGGAGGATCCTGAAGTCCAACATGGTCAGCTTAAAAAGTTTTCTCTGCGTGAGCTGCAAGTTGCAACAGATAACTTTAGTAATATACACATTCTGGGTAGAGGTGGATTTGGAAAGGTTTACAAAGGACGCCTAGCTGATGGCTCTCTCATAGCAGTGAAAAGACTTAAAGAGGAGCGCACGCAAAGTGGGGAGCTGCAATTTCAAACAGAAGTGGAAATGATCAGCATGGCTGTGCACCGTAATCTGCTTCGCCTTCGTGGCTTTTGCATTACACCTACTGAGCGGTTGCTTGTGTATCCTTTCATGGTTAATGGAAGTTTGGCATCATGTTTACGAGGTCGTCCTGAATCTCAACCACCACTTGACTGGCTGATGCGGAAGCGTATTGCGCTGGGATCTGCTAGGGGACTTTCTTATTTGCATGATTATTGTGACCCGAAGATTATTCATCGTGATGTCAAGGCTGCAAATATATTGTTGGATGAGGAATTTGAAGCAGTTGTTGGAGATTTTGGTTTGGCACAACTCATGGATCACAAACTTACTCATGTTACTGCTGCAGTATGTGGTACGTTTGGGCATATAGCACCAGAGTACCTGAGAACTGGAAAGGCTTCAGAAAAGACTGATGTTTTTGGATATGGCGTGATGCTTCTTGAACTAATAACTGGACAGAAGGCTTTCAATCTAGTAGGACTTGCCAATAACGATGATGTGATGTTGCTTGATTGGGTTAAAGGACTTCTGAAAGACAAGAAGTTGAAAACACTGGTAGATAAAGATTTACAGGGAGGTTATTCTGATGAGGAGGTAGAGCAGTTAATCCAAGTGGCCTTACTATGCACAAAAAGCTCCCATATGGAACGACCAAAAATGTCAGAGGTGGTTAGAATGCTAGAAGGTGATGGTTTGGTAGAGAAATGGGAGCAATGGCAGAAAGAAGAGATGTTCCGGAAAGATTTTAACGCCAACGCGTACATGCCTCGCCCTAATGCAAATTGGATAGTAGACTCAACTTCACAAATCCCGCCAGATGAACTATCAGGCCCTAGATGA 1857 0.4356 MERVTSSSLPSFLVWAIFMFGFVLQASGNAEGDALSALRNSLNDPNNFLQRWDSTLVNPCTWPHVKCNDADSVTRIDLGNANLSGQLVPDLDKLSNLEYLVLYSNNITGKIPDELGNLTNLVSLDLYANNLTGTIPNSLGNLGKLRFLRLSNNSLSGGIPVTLTNIASLQVLDLSNNKLKGDIPTEGSFSLFTPVSYQNNPGLIRPKSTPSSPLTPPSQASSGNSNTGAIAGGVAAGAALLFAAPAIAIAYWRRRKPQDHFFDVPAEEDPEVQHGQLKKFSLRELQVATDNFSNIHILGRGGFGKVYKGRLADGSLIAVKRLKEERTQSGELQFQTEVEMISMAVHRNLLRLRGFCITPTERLLVYPFMVNGSLASCLRGRPESQPPLDWLMRKRIALGSARGLSYLHDYCDPKIIHRDVKAANILLDEEFEAVVGDFGLAQLMDHKLTHVTAAVCGTFGHIAPEYLRTGKASEKTDVFGYGVMLLELITGQKAFNLVGLANNDDVMLLDWVKGLLKDKKLKTLVDKDLQGGYSDEEVEQLIQVALLCTKSSHMERPKMSEVVRMLEGDGLVEKWEQWQKEEMFRKDFNANAYMPRPNANWIVDSTSQIPPDELSGPR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0983 618 Gene3D Phosphorylase Kinase; domain 1 261 368 - -
Lja5g0983 618 ProSiteProfiles Protein kinase domain profile. 292 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0983 618 PANTHER BNAA08G11770D PROTEIN 11 618 IPR031048 GO:0004675|GO:0005102|GO:0006468
Lja5g0983 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 618 - -
Lja5g0983 618 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Lja5g0983 618 ProSiteProfiles Leucine-rich repeat profile. 168 190 IPR001611 GO:0005515
Lja5g0983 618 Gene3D Ribonuclease Inhibitor 28 212 IPR032675 -
Lja5g0983 618 SUPERFAMILY L domain-like 31 192 - -
Lja5g0983 618 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Lja5g0983 618 Gene3D Transferase(Phosphotransferase) domain 1 369 586 - -
Lja5g0983 618 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Lja5g0983 618 SUPERFAMILY Protein kinase-like (PK-like) 271 567 IPR011009 -
Lja5g0983 618 PRINTS Leucine-rich repeat signature 166 179 - -
Lja5g0983 618 PRINTS Leucine-rich repeat signature 121 134 - -
Lja5g0983 618 MobiDBLite consensus disorder prediction 202 225 - -
Lja5g0983 618 SMART serkin_6 292 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0983 618 Pfam Protein kinase domain 293 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0983 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0983 Lja-Chr5 9655454 9662370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0983 9 618 Receptor kinase-like Gene Family AT4G33430 70.821 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lja5g0983 Pkinase 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0983 K13416 - gmx:100800522 920.613