Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0968 ATGGAGGAAGGGTTGGAGGCAGATGATTCTATTGTGAGGTCACTGAACAACAGCACAAGGATGAGCATAGGATCTTGGAGCAGGAGGAGTTGGGCCTCAGTAACTGTTCCTGAGCTCTGGAGTGGGCATGGTGGGGATGTGTTTGAAGGGAGCATGAGGAGGGAGGTTGATGATGAGGAAGAGCTGAAGTGGGCTGCCATAGAGAGGCTTCCAACATTTGAAAGGATGAGGAAGAGCATAGTGAAACAGGCTTTGGAGAGTGGAAGGTTCAACTATGAGGAGGTTGACATATGCAAGCTTGGTATGCAAGACAGAAAGACACTCCTTGATGGTATTCTAAGGATTGTTGAAGAAGATAATGAGAAGTTCCTCTCCAAGATGAGGGAGAGGATTGATAGGGTCGGTATAGAGATTCCTAAGGTTGAGGTTAGATTTGAGCATTTGAATGTAGATGGGGATGCATTTAATGGAACCAGAGCACTTCCCACACTTGTGAATTCCACCATGAATGCGATAGAGAGAGTTCTTGGATCAATAAAGCTTCTCCCCTCAAGGAAATGTGTTGTCAAGATACTTCAAGATGTTAGTGGAATCGTCAGGCCAGCAAGGGTGACATTGCTTTTGGGGCCTCCAGGATCAGGAAAAACCACATTGCTGCAGGCACTTGCAGGGAAACTGGACAAGGATTTAAGGGTATCAGGAAGAGTCACCTACTGTGGTCATGAGTTACCAGAATTTGTTCCTCAAAGGACATGTGCTTATATTAGTCAGCATAATCTTCATCATGGAGAGATGACAGTCAGAGAGACACTGAACTTCTCTGGACGCTGCTTGGGAGTTGGAACAAGGCATGATCTGCTTGTAGAATTGACAAGGCGAGAAAAGCAAGAAGGAGTCAAACCAGATCCTGAGATAGATGCTTTCATGAAAGCCACCGCGATGGAAGGTCAAGAAACAAGTCTCATTACAGATTATGTTCTCAAGATTCTTGGATTGGAACTATGTGCTGATACTATGGTGGGAGATGAGATGAGAAGGGGAATATCTGGTGGAGAAAAAAAGCGGTTGACTACTGGTGAGATGTTGGTAGGACCTGCAAAAGTTTTTTTGATGGATGAGATTTCAACTGGTTTGGATAGTTCCACAACCTTCCAAATTGTTAGGTCCTTGAGTCAGCTAGTTCATATCATGGATGTTACAATGATAATCTCTCTTTTACAACCTGCACCAGAAACATTTGAGTTTTTTGATGACATAATCCTACTTTCAGAAGGTCAGATTGTGTACCAAGGTCCACGTGAGAATGTTCTCAACTTTTTTGAGAGTGTGGGCTTCAAATGCCCTGAAAGGAAAGGAGTTGCAGATTTTTTACAGGAAGTTACTTCAAGAAAGGACCAAGAACAGTACTGGTTCATGAGGGACAAACCTTACCATTATGTCAGTGTGCCTGAGTTTGTAACTCACTTCAATAATTATAGCATTGGTCAAGGACTTTCTGAAGAGCTTCAGGTTCCTTATGACCGTTCAAAAACTCATCCTGCTGCATTGGTTAAAGATAAATATGGGATCTCAAAATCAGAACTCTTCAAGGCATGTTTTGCAAGAGAGTGGCTACTTTTGAAACGCAGTGCTTTTATATACATATTTAAGACTACTCAGATTATGATAATGTCTTTGATTACCATGACAGTGTTTTTTAGAACAGAAATGAAACATGGCCAGCTTGAGGATGGGAGAAAATTTTATGGTGCACTGTTTTTCAGTCTCATTAATATAATGTTCAACGGAATGGCTGAGCTTGCAATGACTATTTTTAGACTCCCTGTGTTCTTCAAGCAGAGAGATTCATTATTCTATCCGGCATGGGCTTTTGCACTGCCCATATGGATCTTCCGGATCCCTCTCTCTTTAGCAGAGTCAGGATTATGGGTAGTCCTTACTTATTACACTATAGGGTTTGCTCCAGCTGCAAGCAGATTCTTTCGTCAGTTATTAGCATTCTTCTGCGTTCATCAGATGGGTTTGTCTCTATTCCGATTCATTGCTGCTGTTGGAAGGACACAAATTGTGGCAAATACACTTGGTACCTTTATACTACTAGTAGTTTTTGTACTTGGTGGGTTTATCATTGCCAGAGATAACATTGAACCGTGGATGATATGGGGTTATTATGCTTCTCCTATGATGTATGGTCAGAATGCCATTGCCATCAATGAGTTCCTTGACGAGAGATGGAGCGCGCCTAATCTGGACCCAAGAGTCCCTGAGCCCACAGTTGGGAAGGCTCTTCTTAAGGCTAGAAGCATGTTTACAGAAGAATATTGGTACTGGATTTGTGTTGGTGTTCTCCTAGGCTTTTCTCTGCTTTTCAACATTTGTTTTATTGCTGCTCTAACATTTCTGAACCCATTTGGAGATTCTAAATCTATTGTTGTGGAGGATGAAGATGAGAAAAAGGGAACTGGAAAAAAGAGTTTTGTTTCAACTGCTAAATCGTTCGAGCACACTGAAATGGCAGAAAGAAACACCTCGGAGAGTTCAATTCGCAAAGCAGATACAGCAACAACCGAGAGGGGAATGGTCTTACCCTTTAGGCCCTTATCCCTTGCTTTTGATCACGTGAATTACTACATCGATATGCCTGCTGAAATGAAAAAACAAGGAGTTAAAGAGAGTCGGCTCCAATTACTAAGAGATGTCAGTGGTGCTTTCAGGCCTGGAGTGCTGACAGCATTAGTAGGTGTAACTGGTGCCGGAAAAACCACATTGATGGATGTTCTTGCTGGAAGAAAAACTGGTGGTTATATTGAAGGAAACATCAGCATATCTGGTTACCCGAAAAACCAAGCAACTTTTGCTCGAATCAGTGGATATTGTGAACAAAATGATATCCATTCTCCAAATATAACGGTCTATGAATCTATTGTGTTTTCTGCTTGGTTACGTCTTGGTAAGGAGGTCAAGAGAGAAATACAAAAGATGTTTGTTGAGGAAGTAATGAAACTCGTTGAGCTATATCCTGTGAGGAATTTCTTAGTAGGCCTTCCTGGTGTAGATGGTTTATCAACAGAACAGAGAAAGAGACTCACCATTGCTGTAGAATTGGTTGCCAATCCTTCTATTATCTTTATGGATGAGCCGACCTCAGGGCTGGATGCTAGAGCCGCAGCTATTGTAATGCGTACTGTCAGAAATACAGTAGATACAGGAAGAACTGTTGTCTGCACAATTCATCAACCAAGCATTGACATATTTGAAGCTTTTGATGAGCTGCTTTTGATGAAGAGAGGAGGACAAATCATATATAGTGGTCCCCTTGGTCAGCAATCTCAGAAGCTTATAGAGTACTTTGAGGCTATCCCGGGAGTTCCTAGAATAAAAAATGGATATAATCCTGCCACATGGATGTTAGAGATCAGTTCTCCATCAGTTGAGTCTCAGCTTAGTGTAGACTTTGCAGAATTGTACACTAAGTCTGAATTGTACCAGAGGAATCAAGAACTTATTGAAGAGCTAAGCATGCCATTGCCGGGAACAAAGGATCTTGATTTCCCAAGGAAATACTCCCGGTCCTTTATCACACAATGTAAAGCTTGCTTCTGGAAACAACATTGTTCCTACTGGAGGAATCCGCAGTATAATGCAATCCGGTTTTTCATGGCAATAGCTGTAGGTGTTATTTTTGGACTCATTTTCTGGAGACAAGGAGAAAAAATACACACGGAACAAGATCTTATGAATATCATGGGAGCTATATATGCAGCTATTTTCTTTCTTGGAGCCTCCAACACTGCCTCTGTTCAACCTGTCGTTGCAATAGAAAGAACGGTCTTCTACCGTGAAAGAGCGGCTGGAATGTACTCAGCTCTTCCTTATGCATCTGCTCAGGTAGCAATGGAATGCATTTATGTTGCAATCCAGACATTGTCCTATACTCTTATCCTATACTCAATGATTGGGTTCATTTGGCAAGCTGACAAGTTCTTCTGGTTCTACTACTTCATATTCATGTCCTTTGTCTACTTCACACTTTATGGAATGATGACATTGGCTCTAACACCAAACCACCAAATTGCTGCAATTGTTATGTCCTTCTTTCTGGTTTTCTGGAACATATTCTCGGGTTTCGTTGTCCCAAAATCGCAAATTCCTATATGGTGGAGGTGGTGTTACTGGGCATGCCCCACTGCATGGACTATATATGGGGCACTGACATCCCAGTTTGGAGACAAAGATACTCTTATTGAGGTACCAGGATATGGATCAATGTCTATAAAAGCATACCTTGAGAAACAGATGGACTATGAGTATGGCTTCCTTGGAGTTGTTGCCGTGGTTCATTTGGTTTTTGTTGCCTTTTTCCTTTTTGTATTTGCATACAGCATCAAGGCCTTCAATTTCCAGAAGAGATAA 4413 0.4179 MEEGLEADDSIVRSLNNSTRMSIGSWSRRSWASVTVPELWSGHGGDVFEGSMRREVDDEEELKWAAIERLPTFERMRKSIVKQALESGRFNYEEVDICKLGMQDRKTLLDGILRIVEEDNEKFLSKMRERIDRVGIEIPKVEVRFEHLNVDGDAFNGTRALPTLVNSTMNAIERVLGSIKLLPSRKCVVKILQDVSGIVRPARVTLLLGPPGSGKTTLLQALAGKLDKDLRVSGRVTYCGHELPEFVPQRTCAYISQHNLHHGEMTVRETLNFSGRCLGVGTRHDLLVELTRREKQEGVKPDPEIDAFMKATAMEGQETSLITDYVLKILGLELCADTMVGDEMRRGISGGEKKRLTTGEMLVGPAKVFLMDEISTGLDSSTTFQIVRSLSQLVHIMDVTMIISLLQPAPETFEFFDDIILLSEGQIVYQGPRENVLNFFESVGFKCPERKGVADFLQEVTSRKDQEQYWFMRDKPYHYVSVPEFVTHFNNYSIGQGLSEELQVPYDRSKTHPAALVKDKYGISKSELFKACFAREWLLLKRSAFIYIFKTTQIMIMSLITMTVFFRTEMKHGQLEDGRKFYGALFFSLINIMFNGMAELAMTIFRLPVFFKQRDSLFYPAWAFALPIWIFRIPLSLAESGLWVVLTYYTIGFAPAASRFFRQLLAFFCVHQMGLSLFRFIAAVGRTQIVANTLGTFILLVVFVLGGFIIARDNIEPWMIWGYYASPMMYGQNAIAINEFLDERWSAPNLDPRVPEPTVGKALLKARSMFTEEYWYWICVGVLLGFSLLFNICFIAALTFLNPFGDSKSIVVEDEDEKKGTGKKSFVSTAKSFEHTEMAERNTSESSIRKADTATTERGMVLPFRPLSLAFDHVNYYIDMPAEMKKQGVKESRLQLLRDVSGAFRPGVLTALVGVTGAGKTTLMDVLAGRKTGGYIEGNISISGYPKNQATFARISGYCEQNDIHSPNITVYESIVFSAWLRLGKEVKREIQKMFVEEVMKLVELYPVRNFLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQIIYSGPLGQQSQKLIEYFEAIPGVPRIKNGYNPATWMLEISSPSVESQLSVDFAELYTKSELYQRNQELIEELSMPLPGTKDLDFPRKYSRSFITQCKACFWKQHCSYWRNPQYNAIRFFMAIAVGVIFGLIFWRQGEKIHTEQDLMNIMGAIYAAIFFLGASNTASVQPVVAIERTVFYRERAAGMYSALPYASAQVAMECIYVAIQTLSYTLILYSMIGFIWQADKFFWFYYFIFMSFVYFTLYGMMTLALTPNHQIAAIVMSFFLVFWNIFSGFVVPKSQIPIWWRWCYWACPTAWTIYGALTSQFGDKDTLIEVPGYGSMSIKAYLEKQMDYEYGFLGVVAVVHLVFVAFFLFVFAYSIKAFNFQKR* 1471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0968 1470 Gene3D - 883 1119 IPR027417 -
Lja5g0968 1470 Pfam ABC-transporter N-terminal 117 166 IPR029481 -
Lja5g0968 1470 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 869 1122 IPR003439 GO:0005524
Lja5g0968 1470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 449 IPR027417 -
Lja5g0968 1470 Pfam ABC-2 type transporter 1078 1144 IPR043926 GO:0140359
Lja5g0968 1470 Pfam ABC-2 type transporter 407 459 IPR043926 GO:0140359
Lja5g0968 1470 Pfam ABC-2 type transporter 1194 1408 IPR013525 GO:0016020|GO:0140359
Lja5g0968 1470 Pfam ABC-2 type transporter 528 740 IPR013525 GO:0016020|GO:0140359
Lja5g0968 1470 SMART AAA_5 201 425 IPR003593 -
Lja5g0968 1470 SMART AAA_5 906 1098 IPR003593 -
Lja5g0968 1470 Gene3D - 179 479 IPR027417 -
Lja5g0968 1470 PANTHER ATP-BINDING CASSETTE TRANSPORTER 14 1470 - -
Lja5g0968 1470 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 14 1470 - -
Lja5g0968 1470 CDD ABCG_PDR_domain2 866 1104 IPR034003 -
Lja5g0968 1470 Pfam ABC transporter 897 1049 IPR003439 GO:0005524
Lja5g0968 1470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 892 1108 IPR027417 -
Lja5g0968 1470 Pfam ABC transporter 192 374 IPR003439 GO:0005524
Lja5g0968 1470 Pfam Plant PDR ABC transporter associated 756 811 IPR013581 -
Lja5g0968 1470 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 176 449 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0968 Lja-Chr5 9439674 9450752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0968 894 1081 Calmodulin-binding Proteins AT2G36910 27.451 1.65e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0968 K08711 - gmx:100786666 2459.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0968 5 9439674 9450752 Lja5g0968 5 9439674 9450752 ECH