Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0964 ATGGCGAAACAAACTCCATCTGTAATCTCTATCAATCTCCCTTTGCTTCTTCTCCTCTTCACTATAGCAGAAGTGGAAGGCAACAAGAACAACACTATGAGTGTGAAGAAGCTGTTTGTGTTTGGGGACTCATATGTTGACACAGGGAATTCCATGGACTCAATATCCTATAAGCCTCCCAGTGGAATTACTTTTCCTGGTAAACCTGCTGGTAGATTCTGCAACGGTCGCGTCCTCACCGATTACATTGCTTCCTTTCTGAAAATCAAACCCCCTGCACCATACGCATTGAGAAATTCCTTAGAGCAACAACATGGTATGAACTTTGCTTACGGAGGAACTGGCATTTTCAATACTTTGGTTGATAGGCCAAACATCACTGTTCAGATCGATTCATTTGAGAAGCTGATCCAGCAAAATGTTTATACCAAACGTGACCTTGAATCCTCAGTTGCTTTGGTGAATGCTGGTGGTAATGACTATCTCACATATTCAGTAAAAAACGGGAGCATCCAGGATATATCAGGCTTCACTGCATCCCTTGTGAAGCAAATGTCTTTAAATCTGAAACGCATACACACCTTGGGAATAAATAAAATAGCAGTTGGATTATTAGAGCCTATTGGGTGTATGCCTATGTTTACTGCAGCTTCTTCACAAGACAAGTGCATTGAAACTTTCAACTTGGTCTCAAAAAATCACAGCCAAATGCTCTTCCAAACGGTTCAACAACTCAACAAGGAAATGGGAAAATCGGTTTTCATCACACTTGATCTCTACAACTCTTTCCTCTCCACAATTGCAACTATGAAGAAAGGGCATGCTGAAAACTCAACATTGATGAATCCGTTGCAACCGTGTTGTGTGGGAGTGAGTGCGGATTATTACTGTGGAAGTGTGGATGAGAAAGGGGAGAAGAAATATAATATATGTGAGAAGCCAGAGTTTTCATTCTTTTGGGAGGGAGTTCACCCTTCTCAACAGGGTTGGTATCAAGTCTACAAGAGGTTGCAATCTTCTCTACAGCAACTTAGAGAGTGA 1041 0.415 MAKQTPSVISINLPLLLLLFTIAEVEGNKNNTMSVKKLFVFGDSYVDTGNSMDSISYKPPSGITFPGKPAGRFCNGRVLTDYIASFLKIKPPAPYALRNSLEQQHGMNFAYGGTGIFNTLVDRPNITVQIDSFEKLIQQNVYTKRDLESSVALVNAGGNDYLTYSVKNGSIQDISGFTASLVKQMSLNLKRIHTLGINKIAVGLLEPIGCMPMFTAASSQDKCIETFNLVSKNHSQMLFQTVQQLNKEMGKSVFITLDLYNSFLSTIATMKKGHAENSTLMNPLQPCCVGVSADYYCGSVDEKGEKKYNICEKPEFSFFWEGVHPSQQGWYQVYKRLQSSLQQLRE* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0964 346 SUPERFAMILY SGNH hydrolase 36 343 - -
Lja5g0964 346 Pfam GDSL-like Lipase/Acylhydrolase 38 329 IPR001087 GO:0016788
Lja5g0964 346 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 344 - -
Lja5g0964 346 PANTHER OSJNBB0059K02.9 PROTEIN 1 344 - -
Lja5g0964 346 SUPERFAMILY SGNH hydrolase 36 171 - -
Lja5g0964 346 Gene3D SGNH hydrolase 26 344 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0964 Lja-Chr5 9405613 9407779 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0964 35 326 Acyl Lipid Metabolism Gene Families AT4G10950 28.173 1.50e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0964 - - gmx:100790884 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0964 5 9405613 9407779 Lja1g0719 1 6888025 6893234 ECH
Lja5g0964 5 9405613 9407779 Lja5g0964 5 9405613 9407779 ECH