Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0934 ATGGCGAGGATCAAACCTCAGGCTCTGCTACAGCAAAGCAAAAGGAAGAAGGGGCCGGCTCGCATAAGTCCCATGACTATGATGTTTTACGGCTTGATTCTTGTCTTGGTTGTGTTTTTCCTTTATGCTTCGTACAGACATTGGTCCAACAGGTCGAGGTTTAACTCAGACAATCATTTGTCAGTCTCCGAGGGTGATGCTTTTTTGGACGCAAGGAAATCTGATCTACCTGGATATGCTGTTGTAAATACCTCTAAAGGCTCTATAGTAATAGAACTTCACAAGGAAAGCGCTCCTGAAGTTGTTGATGAATTCATTGACTTATGTCAAAAGGGGCACTTCAAGGGGATGCTTTTTAATCGAGTAATTAAGCACTACGTGATTCAGGCAGGGGATGGCCAAGGAACAGGAACTACTGAAGATTGGAGCTTGAGAGGAAAGCAATCTACAAGTATGAAACATGAAGCATTCATGCTTGGAACTTCCAAGGGAAAGCACACCAACAAAGGATTCAATCTTTTCATTACAACCGCACCGATACCAGATCTAAACGAGAAACTTGTTGTTTTTGGACAAGTGATCAAGGGAGAGGATGTTGTTCAGGAAATCGAAGAAGTGGATACCGATGAACATTACAATCCAAAGATATCTATTGGTATACTTGACGTGACTCTCAGACAGAAGATCTGA 690 0.4232 MARIKPQALLQQSKRKKGPARISPMTMMFYGLILVLVVFFLYASYRHWSNRSRFNSDNHLSVSEGDAFLDARKSDLPGYAVVNTSKGSIVIELHKESAPEVVDEFIDLCQKGHFKGMLFNRVIKHYVIQAGDGQGTGTTEDWSLRGKQSTSMKHEAFMLGTSKGKHTNKGFNLFITTAPIPDLNEKLVVFGQVIKGEDVVQEIEEVDTDEHYNPKISIGILDVTLRQKI* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0934 229 CDD cyclophilin 81 222 - -
Lja5g0934 229 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 81 223 IPR002130 GO:0000413|GO:0003755
Lja5g0934 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 93 108 IPR002130 GO:0000413|GO:0003755
Lja5g0934 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 IPR002130 GO:0000413|GO:0003755
Lja5g0934 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 184 IPR002130 GO:0000413|GO:0003755
Lja5g0934 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 185 200 IPR002130 GO:0000413|GO:0003755
Lja5g0934 229 SUPERFAMILY Cyclophilin-like 74 225 IPR029000 -
Lja5g0934 229 Gene3D - 67 229 IPR029000 -
Lja5g0934 229 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 76 225 IPR002130 GO:0000413|GO:0003755
Lja5g0934 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 229 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0934 51 225 U-box Gene Family AT5G67530 29.167 1.46e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0934 - - gmx:100781538 389.808