Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0933 ATGACTGAAGATTGTGGTGGAAACACAGTTGCAACCTCCACTACCCCATTAAGCTGGTGGTATCTCCAAGCAAACTCTCTTTCTACTTGGAACGATTCTAATAAACATGCATGGAATAGCCAAATAAACCCAAACTCTTCCTCTTCTTGTGATGAGGATATATCTGTTTCTTCTACCTCTTTCACTAATGCCTCCAACCATTCAAGCCTCACCGTTGAGTCATCACGCAGGCTCGTTGAACCGCCGCATGCACCTTCTTCCTCCAACGAGTTCATGAGAGAACATGCTTCAGATAATCAACTTTGGAGCCATGTCCTATCAGGTGTTGGATCAAATGGCGAGTTGCACAACAGCCAAGAAATTGGAGAGAACTTTCTTGATGCACTTTCATCTAAAAACATGGCTAGTGCTATGTTTGAACCAGCATGTGACTACTTGAAGAAACTTGACACAAGTTGGGACTATAGTGGTTCAACTTCATTCAACAGTTTTGAGAAGCACCTAAATGGGTTTAGTGAGGCACTTATTGAGAATAATGAAAGGTTGACCAAGCTATCTAATCTTGTAAGCACTTGGTCTATTGCCCCACCAGAGCCAGAAGTTAGTAGTCATCAGTTAGATCCACAAACAAACAACATGTCTTTGAATTCTTCTATGGATCATCATCACTATCCACAACCTTTTGGAGATTCCTCATCATGCTCTATTGAAGGAGTAAATAGTAAAGATTCTTCTGGAATGTTCCCTTTCTATGATCAGGAGATGAAGGTGAAGCAAGAATATCATCATGCAAGTGAAGCTGTGTTAGGGAAATCATTTAATGCAAATGGATATCAAAATGGATTGAATAGCCTTTCAGTGGGAGATAATAGTGGTAAATTTTACCATGGTTTCCCCAATCTTTCACCATGCACGAGAAATTCCTCAGATGTTATTTCATTTAACAATAGGCTAGGAAGGCCTGTTAATGTTGGAATCCATGCTCAGAGGCCTAATATGAAATACTCAAACTTATCTGAATCAAAGAAGCAGGGCCTTCAGACACCATCACAGATGAGAACTAATAATGGAAGAGGAGAGGGAACAATACGTGAAGTAAAGAAGAAAAGATCAGAAGAATCATCAGAAGCAATCTCAAAGAAGCCTAAGCAAGACACATCAACAGCTTCTTCTTCAAAGGTGCAGGCACCCAAAGTCAAGCTAGCGGACAAGATCACTGCCCTTCAGCAAATTGTGTCTCCATTTGGAAAGACAGATACAGCATCAGTGCTGTTTGAAGCAATAGGGTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTGAGCAACCCTTACCTGAAGACAAATTTGCATAAGGATCCAAGGGGAAGCTTTGATCGAAAAGATAAGGAGGATGCAAAGCTAGACCTGAGGAGCAAAGGTCTATGTTTAGTTCCAACTTCATGTACTCCTGTAGTTTATAGAGAAAATACTGGACCAGATTACTGGACTCCAGCGTACAGAGGATGTTTGTATAGGTGA 1521 0.4083 MTEDCGGNTVATSTTPLSWWYLQANSLSTWNDSNKHAWNSQINPNSSSSCDEDISVSSTSFTNASNHSSLTVESSRRLVEPPHAPSSSNEFMREHASDNQLWSHVLSGVGSNGELHNSQEIGENFLDALSSKNMASAMFEPACDYLKKLDTSWDYSGSTSFNSFEKHLNGFSEALIENNERLTKLSNLVSTWSIAPPEPEVSSHQLDPQTNNMSLNSSMDHHHYPQPFGDSSSCSIEGVNSKDSSGMFPFYDQEMKVKQEYHHASEAVLGKSFNANGYQNGLNSLSVGDNSGKFYHGFPNLSPCTRNSSDVISFNNRLGRPVNVGIHAQRPNMKYSNLSESKKQGLQTPSQMRTNNGRGEGTIREVKKKRSEESSEAISKKPKQDTSTASSSKVQAPKVKLADKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKTNLHKDPRGSFDRKDKEDAKLDLRSKGLCLVPTSCTPVVYRENTGPDYWTPAYRGCLYR* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0933 506 MobiDBLite consensus disorder prediction 360 380 - -
Lja5g0933 506 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 385 434 IPR011598 GO:0046983
Lja5g0933 506 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 31 492 - -
Lja5g0933 506 MobiDBLite consensus disorder prediction 60 75 - -
Lja5g0933 506 PANTHER TRANSCRIPTION FACTOR BHLH111 31 492 - -
Lja5g0933 506 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 400 450 IPR036638 GO:0046983
Lja5g0933 506 MobiDBLite consensus disorder prediction 60 93 - -
Lja5g0933 506 MobiDBLite consensus disorder prediction 381 395 - -
Lja5g0933 506 MobiDBLite consensus disorder prediction 330 358 - -
Lja5g0933 506 CDD bHLH_AtbHLH_like 400 442 IPR045239 -
Lja5g0933 506 MobiDBLite consensus disorder prediction 325 396 - -
Lja5g0933 506 Gene3D - 397 454 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0933 Lja-Chr5 9044420 9048045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0933 18 506 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 32.359 8.06e-47 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0933 - - aprc:113873522 796.193