Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0911 ATGAATCATAACTTTGTTTCAGACAACAGTCTTATTCTTGAGAGTGATGAAGAAGATGAGGAGAAGGATTTGAACAAAGGTGAAGGTGATGGTAATGATTCTGATTCTTCCAATTACTCCAATGAAAATCCTCCACAGAGGAAGCCTAGTTCCTACAACATCTCATGGCCTCAGAGTTACAGGCAGTCTATTGATCTCTACAGTAGTGTGCCATCACCAAATATTGGATTTCTGGGCACTCCCTCATTGAACAGATTGAGCAGTTCCTTCCTTTCTACATCTCTGACAAGGAGGCACACTCCCGAAGCACTTCCTTCAGTGTCGAAACCTCTGATACAACCGACTGAAGAGGAGCCACAGAGGCGAAGCTCTCACGCCTTGCTTCCCCCTCTTGCTAGGAAGTCTTCTTTGATTAAGAAGGATGCCAAGGTTTCTCATCATGAAATTCCTTCTCGCCAATGCTCCTTTGGACAGGCTGTGCTTAACGGCATAAATGTTCTTTGTGGAGTAGGAATCCTTTCAACCCCTTATGCTGCGAAACAAGGTGGATGGGTCGGGCTTTCTATCTTGTTCCTTTTTGGAATCATTTCCTTCTATACCGGGCTGCTCTTGCGTTCCTGCTTGGACAGTGAACCTGGTATTGAGACATACCCTGACATTGGTCAAGCTGCTTTTGGTACTATTGGACGTATTGCCATTTCAATAGTATTGTATGTGGAATTATATGGTTGTTGCATTGAATACATAATTTTGGAGGGCGACAACTTGGCTACCTTATTTCCAAATGCATACTTAAATTTGGGTGGAATTGTATTGAATCCACAAACTTTGTTTGCTATTATCGCCACCTTGGCTGTTCTTCCAACCGTTTGGCTCCGTGACCTAAGTATTCTCAGTTTTATCTCAGCCGGTGGAGTTATTGCATCAGTTTTAGTGACTATCTGCTTGTTCTGGGTTGGCGTTGTGGACGTTGGCTTTCAGAGCAAAGGGACAACACTCAATCTTACAACTTTTCCTGTTGCATTGGGTCTTTATGGTTACTGCTACTCTGGACATGCTGTGTTCCCAAACATTTATACATCCATGGCAAAGCCAAACCAGTTCCCTGCAGTGCTCTTAGCATGTTTTGGAATTTGCACCTTCCTATATGCCGCCGGGGCTGTTATGGGATACAAGATGTTTGGAGATGCTATACTATCTCAGTTCACTCTTAACTTGCCTCAAGATTTGGTGGCAACTAAGGTTGCTGTGTGGACAACGGTGGTTAATCCATTTACCAAGTATGCGCTGACTATATCTCCAGTGGCAATGAGTCTAGAGGAATTGATACCATCAAACAATGCCAAGTCTTACCTATATTCCATCTTCATCAGAACAGGGTTGGTAGTGTCGACCCTGCTAATTGGTCTGTCAGTTCCCTTTTTTGGTCTGGTTATGTCTTTGATTGGATCACTGCTTACAATGCTTGTTACTTTGATACTACCCTGTGTTTGTTACCTGAGAATTTTGCGGGGAAAAGTCACCCGATTACAGGTAGCACTTTGCATTATAATTATTACCGTAGGTGTTGTATCTTCTGCCTTTGGAACATACTCAGCACTTTCCGAGATTATTAAGAGTTTGGGTGGATGA 1632 0.4314 MNHNFVSDNSLILESDEEDEEKDLNKGEGDGNDSDSSNYSNENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTPSLNRLSSSFLSTSLTRRHTPEALPSVSKPLIQPTEEEPQRRSSHALLPPLARKSSLIKKDAKVSHHEIPSRQCSFGQAVLNGINVLCGVGILSTPYAAKQGGWVGLSILFLFGIISFYTGLLLRSCLDSEPGIETYPDIGQAAFGTIGRIAISIVLYVELYGCCIEYIILEGDNLATLFPNAYLNLGGIVLNPQTLFAIIATLAVLPTVWLRDLSILSFISAGGVIASVLVTICLFWVGVVDVGFQSKGTTLNLTTFPVALGLYGYCYSGHAVFPNIYTSMAKPNQFPAVLLACFGICTFLYAAGAVMGYKMFGDAILSQFTLNLPQDLVATKVAVWTTVVNPFTKYALTISPVAMSLEELIPSNNAKSYLYSIFIRTGLVVSTLLIGLSVPFFGLVMSLIGSLLTMLVTLILPCVCYLRILRGKVTRLQVALCIIIITVGVVSSAFGTYSALSEIIKSLGG* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0911 543 Pfam Transmembrane amino acid transporter protein 153 533 IPR013057 -
Lja5g0911 543 MobiDBLite consensus disorder prediction 31 54 - -
Lja5g0911 543 MobiDBLite consensus disorder prediction 1 54 - -
Lja5g0911 543 PANTHER OS05G0424000 PROTEIN-RELATED 27 540 - -
Lja5g0911 543 MobiDBLite consensus disorder prediction 97 126 - -
Lja5g0911 543 PANTHER AMINO ACID TRANSPORTER AVT1B 27 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0911 Lja-Chr5 8784637 8790953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0911 1 476 Amino Acid or Auxin Permease AAAP Family AT2G39130 68.182 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0911 K15015 - gmx:100775840 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0911 5 8784637 8790953 Lja5g0911 5 8784637 8790953 ECH