Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0894 ATGAAGCTACCAGGAAGCTCTCACTTCACTTCAATGTGCAAGTCCAAAAGAAGCACCATCGTGGTACCACCCAGTATCCGAAACAGAAACCGCCAACCTCAACGATCACGAACCTCGACACCTTCATCGTCAACCACCAGCGATGTCCCCATCACAGAATCCAGAAGCTACATCTATGGCGATAAGGAATGGTCCAATTCATCTTCCATCTCAAGCCACACCTCTCTCACAAGCCTCAAACACTCCCTCCCGGAGAATCCCCACATCTACCACTTCTCTGAAATCACCGCCGCCACTGTGAATTTCTCCGGCCACCGCCTCTCCCCCTCCTCCTGGCGCTGCTCGCTACGATCCCGCGATGTTGTCATCTTCCAGCGCAAGCTCCGCCGGCCCATCGACCCCCCGGATCTCCCCCACCGCCTCGCCCTCATCTGCCGGAGCCACCACAGCAGCCTCGTGAAGCTCCTCGGAGCTTCAATCTCCGGCAGCTACATCTACCTCGTCTACGAATTCATCCCCGGAGCCAGCCTCGCCGATTGCCTCCGCAACCGGAACAATCCTAGCTTCACCAGTCTCTCTACATGGACGTCGAGGATGCAGATCGCTTCCGATCTCGCTCACGGGCTCGACTACGTCCACAATTTCTCCGGTTCGGGTTCGGGATTTGTTCACAACCATATCAAAAGCTCAAGCATCGTCGTCGCCGAGGAGAGTCTCGCCGCGAGGATCTGCCATTTCGGTACGTCGGAGCTTTGCGGCGAGGTTGTTACCGGAGAACCGTCTTCCGAACTGAGGAGATCCGGTAGCAGGAATGTGAGGTTGGAGGGGACGAGGGGGTACATGGCGCCGGAGTTTCAGGCTAGCGGCGTGGCGACGATGAAGACCGACGTGTATGCTTTCGGCGTGGTGGTTCTGGAGCTGCTGAGCGGGGAGGAGGCGGTGAGGTTTGAGTTTGGTGGTGACGGAGGGTACCGGAAGGTGAGTGTGGTGGAGACGGCGAGGGAGGCGGTGGAGGAGCACGGTGGTGGTGTGAGGTTGTGGGTGGATAAGAGGCTGAGGGATTCGTTTCCGGTGGAGGTGGCGGAGAAGATGATTCGGGTCGGGTTGGGGTGTGTGGAGGAGGATCCGAATGAGAGACCGGATATGGGTCGGGTCTCGAATGAGGTATCAAAGTTGTATTTGGAGTCAAAGAAATGGGCAGAGAAGATGGGAACTAACATTGACTTTTCGGTCTCGTTGGCCCCACGGTGA 1251 0.5723 MKLPGSSHFTSMCKSKRSTIVVPPSIRNRNRQPQRSRTSTPSSSTTSDVPITESRSYIYGDKEWSNSSSISSHTSLTSLKHSLPENPHIYHFSEITAATVNFSGHRLSPSSWRCSLRSRDVVIFQRKLRRPIDPPDLPHRLALICRSHHSSLVKLLGASISGSYIYLVYEFIPGASLADCLRNRNNPSFTSLSTWTSRMQIASDLAHGLDYVHNFSGSGSGFVHNHIKSSSIVVAEESLAARICHFGTSELCGEVVTGEPSSELRRSGSRNVRLEGTRGYMAPEFQASGVATMKTDVYAFGVVVLELLSGEEAVRFEFGGDGGYRKVSVVETAREAVEEHGGGVRLWVDKRLRDSFPVEVAEKMIRVGLGCVEEDPNERPDMGRVSNEVSKLYLESKKWAEKMGTNIDFSVSLAPR* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0894 416 MobiDBLite consensus disorder prediction 1 52 - -
Lja5g0894 416 MobiDBLite consensus disorder prediction 8 52 - -
Lja5g0894 416 PANTHER OS09G0572100 PROTEIN 12 416 - -
Lja5g0894 416 ProSiteProfiles Protein kinase domain profile. 97 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0894 416 Pfam Protein tyrosine and serine/threonine kinase 140 387 IPR001245 GO:0004672|GO:0006468
Lja5g0894 416 Gene3D Transferase(Phosphotransferase) domain 1 110 410 - -
Lja5g0894 416 PANTHER OS09G0572100 PROTEIN 12 416 - -
Lja5g0894 416 SUPERFAMILY Protein kinase-like (PK-like) 139 390 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0894 Lja-Chr5 8661447 8663065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0894 85 406 Receptor kinase-like Gene Family AT1G51940 31.045 8.71e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lja5g0894 PK_Tyr_Ser-Thr 7.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0894 - - mtr:MTR_1g094730 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0894 5 8661447 8663065 Lja5g0894 5 8661447 8663065 ECH