Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0879 ATGCGGTCAATTCCTCTTGGAACCTCAGTATCTCCAACTCCTATAAACACTCCAAAAATCTCATGTTTCAATATTAGTTTTAAGAAACCAACCACTTTTCCTTCTTGGGTTTCATCTCCCTCTCATGAACAAGGACTATGCAGAGCCAGTCAAGTTGTTGATTTATTCCCAACTACGTCTCCTGAAATTATTGTCCGAGAGGCCAGGTTAGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCAGAATATTCCTTCCCATTAGATTTTGTGATGAGGATGGACAGATTGGTGGCAATGTTAGCGGGATTCTCTATACCGAACGGCTGCAAAAGAACATGTTTGGTTGCTGTTATTGGCAGCTCTCTTGACGAAACTTTTTTATTTGGAACTGAAGATTTCAAGATTGGTGGCTTTGATGGGAAATTGAGCCTCAACAAGGGATATGTGGCTGGCATATTGACAGTCGATACCGTTGCGGATTTTCTTCCTAGAAGGGCACCACTACGACAGAGAAGGACTGGAATCGCATACATATCAAATGTGGCGGTAAGGGAAAAATTTAGGCAAAAGGGAATAGCTAAACTATTGGTGGCTAAGGCAGAATCACAGGCCAGAAGTTGGGGTTGTCGTGCCATTGCATTACACTGTGATTTGAAAAATCCTGCAGCCACAAAGTTATATAAAGGCCAAGGTTTCAAATGTATCAAGGTTCCAGAAGGAGCTAACTGGCCTCAACCAAAGACTTCACCGGATATTAATTTCCACTTCATGATGAAGCTTCTCAACAAACCAGTTGCTTCTAAATCTAATTAG 828 0.4251 MRSIPLGTSVSPTPINTPKISCFNISFKKPTTFPSWVSSPSHEQGLCRASQVVDLFPTTSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVMRMDRLVAMLAGFSIPNGCKRTCLVAVIGSSLDETFLFGTEDFKIGGFDGKLSLNKGYVAGILTVDTVADFLPRRAPLRQRRTGIAYISNVAVREKFRQKGIAKLLVAKAESQARSWGCRAIALHCDLKNPAATKLYKGQGFKCIKVPEGANWPQPKTSPDINFHFMMKLLNKPVASKSN* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0879 275 Pfam Acetyltransferase (GNAT) family 154 237 IPR000182 GO:0016407
Lja5g0879 275 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 270 - -
Lja5g0879 275 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 62 244 IPR016181 -
Lja5g0879 275 Gene3D - 59 241 - -
Lja5g0879 275 CDD NAT_SF 179 220 - -
Lja5g0879 275 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 117 268 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0879 Lja-Chr5 8471425 8474576 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja5g0879 Acetyltransf_1 3.1e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0879 - - gmx:100305894 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0879 5 8471425 8474576 Lja5g0879 5 8471425 8474576 ECH