Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0824 ATGGAGAGTCTCAAGTTCGCATCTTTGCCTCCTTGTCGACGCTCTGGGATGTTGGGGAAACAGTTGAATTCCCCTCTACTTACTATTGATTCTGCAGCAAAGTTCTGCTATTGCAAGGCTGATCTTGCTGCTGCAACATCAAGTATTCCATTGTCAAAAATCAGATTTTCTTGTAAATTTTCACAAAATATTGCAAAAGCAACATGGGCCTCAAACTCAAATCTTTCTACCAAGCATTGGTTATTGCATTCAATGGGACAGATAGAAAATATAATCACAAGTGATGAAGATCAGAGCATGTGGGAAGCATGCAGGCAAGCTCTGTCTGCATTTAACTTCAGTGATGAAGAAAAGGACAAGATACTTGCAAAAGCATTTGGTCTTGTTCATTCTCCTTATTGGGGAGAAGAGCGTGAGAAGGAGGTTCCCAAATTTGAGACAGTAAATGGAACACTAGACTATCTGAGGAGTTTAAATCTTTCTGATGATGATCTATCCAAGTTGCTCAAAAAGTTCCCAGAAGTTCTTGGATGCAATTTAGAGGAAGAGTTGAAAGCCAATATAAAGATCCTGGAGGAGCAATGGGGTGTTCAAGGAAAATCTCTTAGGAGCCTTCTCCTTCGAAATCCAAAAGTTTTGGGTTATAATGTTGACTGTAAAGGAGACTGTATAGCACAATGCACTAGATGCTGGGTTCGCTTCTAG 705 0.4028 MESLKFASLPPCRRSGMLGKQLNSPLLTIDSAAKFCYCKADLAAATSSIPLSKIRFSCKFSQNIAKATWASNSNLSTKHWLLHSMGQIENIITSDEDQSMWEACRQALSAFNFSDEEKDKILAKAFGLVHSPYWGEEREKEVPKFETVNGTLDYLRSLNLSDDDLSKLLKKFPEVLGCNLEEELKANIKILEEQWGVQGKSLRSLLLRNPKVLGYNVDCKGDCIAQCTRCWVRF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0824 234 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 16 233 - -
Lja5g0824 234 Pfam mTERF 152 215 IPR003690 GO:0003690|GO:0006355
Lja5g0824 234 Gene3D Transcription termination factor 3, mitochondrial 74 228 IPR038538 -
Lja5g0824 234 PANTHER CGI-12 PROTEIN-RELATED 16 233 IPR003690 GO:0003690|GO:0006355
Lja5g0824 234 SMART mt_12 166 198 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lja5g0824 mTERF 2.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0824 - - gmx:100797265 372.859