Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0817 ATGGGAATTTCTTCACATCCTTCTTTTGTTCCCCTCTCTTTGAAGGATCTGCTTCAGGGAACTGAAGAAAGCAGAAACCCCTCATATGGGTATCTGTGGAGCAAACTCTTGGCCGCCAAAAAAAGCGCCAAGAGTAGGAGGCCGCGAGGGATTTTAATGAAGAGGAGGAGAGGCGGTAACAGAAGAGGAACCGTCGCTATCCAGAAACGCGTGAGGACATTGAAGAGGCTTGTACCAAACAGTGATTCCATGGGGTTGGATGGGCTATTCAGAGAAACTGCTGATTACATATTGGCTTTGCAAACGAGAGTAAGAGTGATGCAGGTTATGGTTGATGTATTGACAGGGTATGATGATTGA 360 0.4639 MGISSHPSFVPLSLKDLLQGTEESRNPSYGYLWSKLLAAKKSAKSRRPRGILMKRRRGGNRRGTVAIQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQTRVRVMQVMVDVLTGYDD* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0817 119 CDD bHLH_AtIBH1_like 66 111 IPR044549 GO:0006355
Lja5g0817 119 MobiDBLite consensus disorder prediction 41 62 - -
Lja5g0817 119 PANTHER TRANSCRIPTION FACTOR UPBEAT1 31 116 - -
Lja5g0817 119 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 31 116 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0817 59 118 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 62.295 2.16e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0817 - - gmx:100794627 147.902