Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0815 ATGCCAACAGCAACGTTTGGTGGTGTACAAACTTCAAACGGAGATTCACCCATCAACCATGCTCCTCCCAAACACTCCCCTCATGAATCGCGTGATACTCCTCCTTTATTGTCTGCTTCTCACCCCATCACTCTTAAGTTCATGGACGTGAAATACAGATTGAAGATAGAAAACAAGCAAGGAAAAGGAGGGAGTATCAAGAGATTGTTTACCGCAAACGAATCGTCACCGTCTGATCAGAGATCAACGGTGGGGACGGAGAGAACGATTTTGAACGGTGTCACAGGGATAGCGTGTCCAGGGGAGATCCTAGCGATACTGGGCCCATCAGGTAGCGGGAAATCGACGCTCCTCAACGCGCTTGCAGGGAGGCTCCATGGAAGCGGTCTCACCGGAACAATCCTCGCCAACTCGGCGAAGCTCGGAAAATCGATTCTCCGGCGAACTGGTTTCGTCACGCAGGACGATGTGCTGTATCCTCATCTGACCGTCCGCGAGACGCTGGTGTTCTGCGCCATGCTGCGGCTTCCGAGGACGGTGTCGCATGAGGAGAAATTGGCGGCGGCGGAGTCGGCGATCTCGGAGCTGGGGCTGGAAAAGTGTGAAAACACCATCATCGGGAACAGCTTTGTCCGCGGGGTTTCCGGCGGGGAGAGGAAGCGCGTGAGTATCGCGCATGAGATGCTGGTGGATCCGGCGCTGCTGATCCTCGACGAGCCTACTTCTGGCCTTGACTCCACGGCGGCGCACCGCCTTATTTCGACGCTGGGGACGCTGGCGAAGAAGGGGAAGACGGTGGTTACGTCGGTGCATCAGCCGTCGAGCCGTGTGTACCAGATGTTTGATAAGGTGCTGGTGTTGTCGGAGGGGCAGTGCTTGTATTTTGGGAGAGGCGGCGACGCCATGAGGTACTTGGAGTCGGTTGGGTTCGCGCCATCTTTTCCGGTGAATCCGGCGGATTTTCTGCTCGATCTCGCTAACGGTGTTTGCCATGTGGATGGATCAAGTGAAAGAGATAAGCCAAACATAAAGCAAAGCCTAGTCCATTCATACAACACAGTACTGGCCCCCAAGGTAAAAGCTGCCTGCATAGACACTGCAAGTGTTCCTACAAAAAACACTCACTCTTCAAGAGAACGTAGATACAATGACAGGGTTAGCTTCTTAGATTGGTTTTACCAATTAAGTGTTCTGCTACAGAGAAGCCTCAAGGAAAGAAAATATGAATCCTTCAACACTCTGAGAGTCTTTCAAGTCATTGCTGCTGCACTATTAGCTGGTTTAATGTGGTGGCACTCAGATTACAGAAACATTCAAGACAGGCTTGGATTACTCTTCTTCATTTCCATTTTCTGGGGAGTCTTCCCATCTTTCAATTCTGTTTTCGCATTCCCTCAAGAACGCGCCATCTTCATGAAGGAACGCGCTTCCGGTATGTACACATTGTCATCCTATTTCATGGCTAGAGTTGTTGGAGACATGCCCATGGAGCTTATTCTTCCCACAGTTTTCCTCATTGTCACATACTGGATGGGTGGATTGAAGCCTGATTTGTGGGATTTTCTCTTGACTCTATTGGTTCTTCTTGGATATGTGCTTGTGTCACAGGGTCTTGGGCTTTTCTTAGGTGCAGCAATTATGGATGCCAAACAGGCTTCCACAGTTGCAGCAGTGACAATGCTAGCTTTTGTGTTAACTGGTGGATACTATGTCCATAAGATCCCATCTTGCATGGCTTGGATCAAATATATATCCTCAACTTTTTACTGCTATAGGCTTTTGACTAGAATCCAATATGGGGATGGAAAGAAAATATCATACCTTATGGGTTGCTATCATGGTGAGAGTGCTGGCTGCAAGTTTCTTGAAGAAGATGTGGTTGGGCAAATTGGCACTGTGGGAAGCATTGGGATTTTGTTTTTCATGTTTGTGTTTTACAGAGTATTGGCCTACCTTGCCTTGAGGCGCTTCAAGAGTTGA 1980 0.4919 MPTATFGGVQTSNGDSPINHAPPKHSPHESRDTPPLLSASHPITLKFMDVKYRLKIENKQGKGGSIKRLFTANESSPSDQRSTVGTERTILNGVTGIACPGEILAILGPSGSGKSTLLNALAGRLHGSGLTGTILANSAKLGKSILRRTGFVTQDDVLYPHLTVRETLVFCAMLRLPRTVSHEEKLAAAESAISELGLEKCENTIIGNSFVRGVSGGERKRVSIAHEMLVDPALLILDEPTSGLDSTAAHRLISTLGTLAKKGKTVVTSVHQPSSRVYQMFDKVLVLSEGQCLYFGRGGDAMRYLESVGFAPSFPVNPADFLLDLANGVCHVDGSSERDKPNIKQSLVHSYNTVLAPKVKAACIDTASVPTKNTHSSRERRYNDRVSFLDWFYQLSVLLQRSLKERKYESFNTLRVFQVIAAALLAGLMWWHSDYRNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARVVGDMPMELILPTVFLIVTYWMGGLKPDLWDFLLTLLVLLGYVLVSQGLGLFLGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKIPSCMAWIKYISSTFYCYRLLTRIQYGDGKKISYLMGCYHGESAGCKFLEEDVVGQIGTVGSIGILFFMFVFYRVLAYLALRRFKS* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0815 659 MobiDBLite consensus disorder prediction 1 40 - -
Lja5g0815 659 MobiDBLite consensus disorder prediction 1 19 - -
Lja5g0815 659 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 23 657 - -
Lja5g0815 659 SMART AAA_5 100 291 IPR003593 -
Lja5g0815 659 Pfam ABC transporter 97 242 IPR003439 GO:0005524
Lja5g0815 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 305 IPR027417 -
Lja5g0815 659 Pfam ABC-2 type transporter 393 598 IPR013525 GO:0016020|GO:0140359
Lja5g0815 659 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 314 IPR003439 GO:0005524
Lja5g0815 659 Gene3D - 80 307 IPR027417 -
Lja5g0815 659 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 23 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0815 Lja-Chr5 7720992 7727521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0815 90 296 Calmodulin-binding Proteins AT2G36910 29.384 1.20e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0815 K05681 - gmx:100812367 1089.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0815 5 7720992 7727521 Lja5g0815 5 7720992 7727521 ECH