Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0809 ATGGAAGCACCACAACCTCCACCGGCGCCAACTCAGCCAAGCCCTCTCCGCAAGATGGCCGTCGTTGCCTCCATTGCTGCGGGGGTCCAATTTGGCTGGGCCTTGCAGCTCTCCCTCCTCACTCCCTATGTCCAGCTACTGGGCATCCCTCACAAATGGGCCGCTTACATCTGGCTCTGCGGCCCGATCTCTGGCCTCCTGGTGCAGCCCATTGTCGGTTATCACAGTGACCGCAGCACTTCACGCTTTGGCCGCCGCCGGCCATTCATCACCGCCGGAGCACTCGCCATCGTCATCGCTGCCTTCCTCATCGGCTACTCTGCCGACATCGGCCACGCCTTGGGCGACCCCCTCACCGGAACCCGTCCCCGTGCCATAGCCGTTTTCGTGGTCGGATTCTGGATATTCGACGTAGCGAATAACGTACTCCAAGGTCCTCTCCGGGCCTTCCTCGGCGACCTCGCCGCCGGCGACCAGCGCAAAACACGAACGGCAAACTCCCTCTTTTCGTTCTTTATGGCAATTGGCAATGTCGGCGGCTTTCTCCCATTCACGAAAACAGTCGCCTGTGACGAATCATGCGCGAATCTTAAATGTTGCTTCATCATTTCGGTTACGCTTCTGTTGACTCTTGCCACCGCCGCCATGTTATACGTGAAGGAGGAAGCGCAAACGCAAACGGTAGCTGGTGATGATGGTGGGATGCGTTGCTTTGGCGGGTTGTTCAGTGCGTTTCTCACACTGAACAAACCGATGTGGATTCTGCTGTTGGTGACTTCTTTGAATTGGCTGGCATGGTTCCCATTTTTCCAATTCGACACCGATTTTGTGGGGAGAGAGGTGTTCGGTGGAGAAAAAGTTGACCAGAAATTTTTTTACAAGGGGGTGCAATGGGGAACATTGGGTCTGATGCTTAACTCTGTGGTTCTCGGTGCGACATCCTTGGGGATGGAACGGCTGTCTCGGGGAGTTGGCGGAGTGAAGAGGTTGTGGGGGATCGCGAACTTACTGCTTGCAGTGGGTTTGGGAATGACGGTTTTGGTGGCGAAGCTGGCGAAGGAGTCGCGTCATTACGGCGTCGGTGGCCAGCTGCTCCAGCCGGACGGTGGCATCAAAGCCGGGACGCTAATTCTCTTTACCATCCTCGGCATCCCACTGGCGGTTACTTTCAGTATACCGTTTGCTCTAGCATCTATATTCTCCAGCACCACTGGGGCAGGCCAAGGGTTATCTCTAGGAGTTCTAAATATTTCCATTGCCATACCACAGATGGTGGTGTCTCTTGTCATTGGAAATTGGAATGAGCAGTTTGGAGGTGGCAATTTGCCGGCTTTTGTGGCAGGTGCTGTGGCGGCTGCAGCCAGTGGGATTTTATCATTGGTCCTACTGCCATCTCCACCGCCAGATTCGGTCAACGCTGCCGCCGGAGGAGGACATTAA 1440 0.5549 MEAPQPPPAPTQPSPLRKMAVVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWAAYIWLCGPISGLLVQPIVGYHSDRSTSRFGRRRPFITAGALAIVIAAFLIGYSADIGHALGDPLTGTRPRAIAVFVVGFWIFDVANNVLQGPLRAFLGDLAAGDQRKTRTANSLFSFFMAIGNVGGFLPFTKTVACDESCANLKCCFIISVTLLLTLATAAMLYVKEEAQTQTVAGDDGGMRCFGGLFSAFLTLNKPMWILLLVTSLNWLAWFPFFQFDTDFVGREVFGGEKVDQKFFYKGVQWGTLGLMLNSVVLGATSLGMERLSRGVGGVKRLWGIANLLLAVGLGMTVLVAKLAKESRHYGVGGQLLQPDGGIKAGTLILFTILGIPLAVTFSIPFALASIFSSTTGAGQGLSLGVLNISIAIPQMVVSLVIGNWNEQFGGGNLPAFVAGAVAAAASGILSLVLLPSPPPDSVNAAAGGGH* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0809 479 PANTHER SUGAR TRANSPORTER 10 472 - -
Lja5g0809 479 Pfam MFS/sugar transport protein 27 267 - -
Lja5g0809 479 SUPERFAMILY MFS general substrate transporter 17 468 IPR036259 -
Lja5g0809 479 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 10 472 - -
Lja5g0809 479 CDD MFS_SLC45_SUC 22 442 - -
Lja5g0809 479 TIGRFAM GPH_sucrose: sucrose/H+ symporter 15 468 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lja5g0809 479 Gene3D MFS general substrate transporter like domains 17 230 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0809 Lja-Chr5 7608261 7610489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0809 1 470 Sucrose Transporter Gene Family AT1G71890 59.184 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0809 K15378 - gmx:547679 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0809 5 7608261 7610489 Lja5g0809 5 7608261 7610489 ECH