Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0808 ATGGCACACAACAATGAAACCAAGCCTTCTTCTCTTCACGTGGAAGCCCCACCACCAGTACCACCGGAGGAACCTAGTCCTCTCCAGAAGATCATCGCCGTGGCTTCAATCGCTGCCGGCGTGCAATTCGGGTGGGCCCTGCAACTATCCCTACTCACCCCCTACGTCCAGTTACTCGGAATACATCACAATCAAGCAAACTTAATCTGGCTCTGCGGCCCAATCTCCGGCATTCTAGTCCAGCCCATCGTCGGCTACCACAGCGACCGCTGCACCTCCCGCTTCGGCCGCCGCCGTCCCTTCATCACCGTCGGAGCATTCGCCGTCGTCATCGCCGCCTTCCTTATCGCCTACTCCGCAGACATCGGTCACTCCACTGGAGACTCCATCACCAGAAAAGCTCGTCCCCGCGCCATCGCCGTCTTCGTCGTCGGATTCTGGATCTTCGATGTCGCAAACAACATGCTCCAAGGCCCGCTCCGCGCCTTCCTCGCCGACCTAGCCGCCGGCGACCGACGCAAAACTCGCACAGCAAACTCCTTCTATTCCTTCTTCATGGCGATCGGAAATGTTGGCGGCTATGCTGCCGGCGCCAACGGCAAACTCTACCACCGTTTCCCCTTCACCAAGACAATCGCCTGTGATGCCTCGTGCGCGAACCTGAAGAGCTGTTTCTTCATCTCTGTCACTCTTCTCTTGATTCTCGCCACCGGAGCGATGATCTACGTGAAGGAGCAACCGCAAACGGCGTTGTTTCAGAAAACCGACGACAGTTACGGCGGTGATGATGGTGATCACGCTCACGCGGGTGGCATGCGCTGCTTTGGGGAATTATTCGGTGCGTTTCGCACCCTGAAGAGACCCATGTGGATCCTTCTGTTGGTGACGTGTCTGAATTGGTTAGCGTGGTTTCCGTTTTTTCAGTTTGATACTGATTACGTGGGGAGAGAGGTGTACGGTGGGGAAGTTAGACAACCAATTTATAACGCGGGGGTGCGATTGGGTACGTTCGGGCTCATGTTAAACTCGGTGGTCCTCGCTGCGACGTCGTTGGGGATGGAAGCGTTGTCGCGTGGGGTTGGCGGAGTTAAGCGGTTGTGGGGGATCGTTAACTTGCTGCTTGCGGTTGGTTTGGGTATGACTGTTTTGGTGGCCAAGCTGGCGAAGCAGTCGCGTCATTATGGCGGCGTCAGCGAGTTGCTACCGCCTGACGGTGGCATCAAGGCCGGCACGTTGGTTCTCTTTACTATCCTTGGCATCCCACTCGCGGTTACTTACAGCATACCCTTTGCTCTAGCATCAATATTCTCCAGCACCACTGGGGCAGGCCAAGGGTTATCTCTAGGAGTTCTGAATATTTCAATTGCCATACCACAGATGGTGGTGTCTCTTGCCATTGGAAAATGGAATGACCAATTTGGAGGAGGTAATTTGCCAGCTTTTGTGGCGGGTGCTGTGGCGGCTGCAGCCAGTGGCATTTTATCCTTAGTCCTACTGCCGTCTCCACCGCCGGATTTGGCCAAGGCTGTAACTGCTGCCGGAGGAGGCTTCCATTAA 1557 0.5556 MAHNNETKPSSLHVEAPPPVPPEEPSPLQKIIAVASIAAGVQFGWALQLSLLTPYVQLLGIHHNQANLIWLCGPISGILVQPIVGYHSDRCTSRFGRRRPFITVGAFAVVIAAFLIAYSADIGHSTGDSITRKARPRAIAVFVVGFWIFDVANNMLQGPLRAFLADLAAGDRRKTRTANSFYSFFMAIGNVGGYAAGANGKLYHRFPFTKTIACDASCANLKSCFFISVTLLLILATGAMIYVKEQPQTALFQKTDDSYGGDDGDHAHAGGMRCFGELFGAFRTLKRPMWILLLVTCLNWLAWFPFFQFDTDYVGREVYGGEVRQPIYNAGVRLGTFGLMLNSVVLAATSLGMEALSRGVGGVKRLWGIVNLLLAVGLGMTVLVAKLAKQSRHYGGVSELLPPDGGIKAGTLVLFTILGIPLAVTYSIPFALASIFSSTTGAGQGLSLGVLNISIAIPQMVVSLAIGKWNDQFGGGNLPAFVAGAVAAAASGILSLVLLPSPPPDLAKAVTAAGGGFH* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0808 518 MobiDBLite consensus disorder prediction 1 24 - -
Lja5g0808 518 PANTHER SUGAR TRANSPORTER 22 509 - -
Lja5g0808 518 TIGRFAM GPH_sucrose: sucrose/H+ symporter 27 504 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lja5g0808 518 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 22 509 - -
Lja5g0808 518 Gene3D MFS general substrate transporter like domains 29 257 IPR036259 -
Lja5g0808 518 Pfam MFS/sugar transport protein 37 303 - -
Lja5g0808 518 CDD MFS_SLC45_SUC 31 478 - -
Lja5g0808 518 SUPERFAMILY MFS general substrate transporter 31 503 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0808 Lja-Chr5 7556562 7560260 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0808 23 518 Sucrose Transporter Gene Family AT1G22710 62.227 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0808 K15378 - gmx:547679 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0808 5 7556562 7560260 Lja5g0808 5 7556562 7560260 ECH