Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0807 ATGGAGCCTCTTTCCAAACACAACAACCTCAAGCCTTCCTCACTCCACGTAGAAGCACCACCACCGGAGGCAAGTCCTCTCCGCAAAATCATCGTCGTCGCTTCCATCGCGGCCGGTGTCCAATTCGGTTGGGCCCTACAACTTTCCCTACTCACCCCATATGTCCAACTTCTTGGAATCCCACACAAATGGGCCGCATACATCTGGCTCTGCGGCCCAATCTCTGGCATGCTGGTCCAGCCCATCGTCGGTTACCACAGCGACCGCTGCACTTCACGCTTCGGCCGCCGCCGTCCCTTCATCGCCGCCGGCGCACTCGCCGTCGCCATCGCCGTCTTCCTCATCGGCTACGCCGCCGACTTCGGCCACGCCTTAGGCGACAGGCTTGACAAGAAGATTCGCACCCGCGCCATCGCCATCTTCATCGTCGGATTCTGGATCCTCGACGTCGCCAACAACATGCTCCAAGGCCCCTGCCGCGCTCTCCTCGCCGACCTCTCCGCCGGCGACCACCGCAAAACACGAACCGCGAATTCGTTCTTCTCATTCTTCATGGCCGTCGGGAACGTTCTCGGCTACGCTGCCGGAGCATACAGCAAGCTCTACCATGTCTTCCCGTTCACGAAAACCACCGCCTGCGATGTCTACTGCGCGAATCTCAAAAGCTGCTTCTTCCTCTCAATCGCACTTCTCACAACTCTCGCCACCGCCGCGCTGGTCTACGTGAAGGAAGTTCCACTCTCGCCGGAGAAGGCGGTTATCGATTCCGACGATAACGGTGGCATGCCGTGCTTCGGGCAGTTATCCGGCGCGTTTCGCGAATTGAAGAGGCCGATGTGGATCCTTCTGCTCGTGACTTGCCTCAATTGGATCGCGTGGTTCCCATTCTTGCTGTTCGACACCGATTGGATGGGGAAGGAAGTGTACGGCGGAGAAGTTGGGGATCACGCCTATGATCAGGGTGTTCACGCCGGTGCTCTTGGCCTCATGCTGAACTCGGTGGTGCTCGGAGCGACGTCGTTGGGGTTGGAGTATCTGGCGCGCGGGGTTGGTGGCGTGAAGAGGTTATGGGGAATTGTCAACTTCTTGCTCGCAATTTGCCTCGGTTTAACCGTTCTCGTCACCAAGCTCGCCGAGCATTCCCGGCAATTCACCACCGTGCACGGCCACCAGGAACCTCTGCCTCCTTCCGGTGGCATCAAGGCCGGCGCCTTAACCCTCTTCTCCGTCCTCGGAATCCCCCTCGCCATCACTTACAGCATACCTTTTGCTCTAGCTTCTATATTCTCCAGCACCTCAGGGGCAGGCCAAGGGCTATCTCTAGGAGTGCTGAATCTTGCAATTGTCATACCACAGATGTTGGTGTCAGTATCCAGTGGAAACTGGGATGATCTCTTTGGCGGCGGGAACTTGCCGGCGTTCGTGGTGGGTGCTGTGGCAGCTGCTATTAGTGGCATATTATCAATGGTTCTTCTGCCGTCTCCGCCGCCCGATTTGGTCAAGGCTGCAACCGCTTCCGGAGGAGGCTTCCATTAA 1536 0.5794 MEPLSKHNNLKPSSLHVEAPPPEASPLRKIIVVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWAAYIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADFGHALGDRLDKKIRTRAIAIFIVGFWILDVANNMLQGPCRALLADLSAGDHRKTRTANSFFSFFMAVGNVLGYAAGAYSKLYHVFPFTKTTACDVYCANLKSCFFLSIALLTTLATAALVYVKEVPLSPEKAVIDSDDNGGMPCFGQLSGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGEVGDHAYDQGVHAGALGLMLNSVVLGATSLGLEYLARGVGGVKRLWGIVNFLLAICLGLTVLVTKLAEHSRQFTTVHGHQEPLPPSGGIKAGALTLFSVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMLVSVSSGNWDDLFGGGNLPAFVVGAVAAAISGILSMVLLPSPPPDLVKAATASGGGFH* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0807 511 TIGRFAM GPH_sucrose: sucrose/H+ symporter 26 497 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lja5g0807 511 Gene3D MFS general substrate transporter like domains 25 499 IPR036259 -
Lja5g0807 511 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 19 502 - -
Lja5g0807 511 MobiDBLite consensus disorder prediction 1 22 - -
Lja5g0807 511 CDD MFS_SLC45_SUC 30 471 - -
Lja5g0807 511 Pfam MFS/sugar transport protein 38 292 - -
Lja5g0807 511 SUPERFAMILY MFS general substrate transporter 28 496 IPR036259 -
Lja5g0807 511 PANTHER SUGAR TRANSPORTER 19 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0807 Lja-Chr5 7534223 7537529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0807 2 511 Sucrose Transporter Gene Family AT1G22710 68.269 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0807 K15378 - gmx:547679 847.81