Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0804 ATGTGCCTAGAAACACAAGAACATCCTCTGTTTTTGTACTTTTTCTTCTTTTCCTCTGTAATCACCACCATTACAGGAACCACCACCACCACCATCTCACCACGCTCAACCCTCTATGCTTCCAACACAACCCAATCATGGTCTTCTCCCAACAACACATTCTCCCTCCGCTTCATTCCCCTCCACCCACAACAATCTTCTTCCCCTGCTTCCTTCATAGCCGCAATTGTCTACTCCGGCGGTTCACTCACCATCTGGTCTGTCGGACACGGCGCCACCGTGGACTCCGGTGGATCCCTCCGGTTCCTTTCCGCCGGAAACCTCCGCTTTGTTAATGGGTCGGGGTCCACCTTGTGGGACTCTGGAACTTCCAACATGGGTGTCTCCTCTGCCATGCTTCATGACAATGGAAACTTGGTTCTCTCCAATGACACTGGCTACTCTGTGTGGTCAAGCTTTGACAACCCCATTGATACAATTGTGCCGTCTCAAAATTTCACCATTGGCATGGTTTTGCGTTCTGGGTTGTACTCCTTTTCTGTTCTTAGATATGGGAACCTCACCCTCAAATGGAATGATAGTGTGCCTTACTGGGAACAAGGTTTGGAGTTGAATTCTTCCATGAGTAGAGTGAATTTTAGTTCACCTGTTTTGGGGTTGCAATCAGTGGGAATATTGCAGCTTTCTGATCCAAATTTGACTGCCCCTATGGTGGTTGCTTACAGCAATGACTACAATGAAGGGAGTGATGTGCTTAGAGTTTTGAAGCTGGATGGTGATGGGAATTTGAGGATTTATAGCTCTAAGAGGGGTAGTGGGATTGTGACAGTAAACTGGGTTGCTGTTGCAGATCAATGTGAGGTTTTTGGTTACTGTGGAAATAATGCTATTTGTAGTTACAATGATTCCAACCCCATTTGTGGATGTCCATCTCAGAATTTTGTGATGGTTGATCCTAATGATAGTAGAAAAGGGTGTAAGAGGAAGGTGAGGCTTGAGGATTGTGCAGGGAAGGTGGCTATGTTGCAAGTGGACAATGCAAGATTCTTGACATATCCTCCTCAGTTTTTGATCAATCCTGAGATATTTTTCATTGGTATATCAGCTTGCCGCGGAAATTGTCTTTCATCCAGTTCTTGTTTTGCTTCTACTTCCTTGTCAGATGGAACTGGACTTTGTTACATAAAGACAGGTAATTTTCTTAGTGGTTATCAGAATCTTGCTCAACCTAGCACTTCGTATATCAAGGTTTGTGGACCATTGGTTCCAACCTCACCACCTAATTCCTTGGAGAATGCTAGAGGATGGAAGCATCAGAAGATACATTCTTGGATATTAGCTATAGTAATTTTGAGTACCTTTTTTGGTTTCCTTGCATTTGAGGTTGGTTTATGGTTGTGGTGTTGTAGAAATAGCTCAGGATTTGGAGGGTTTGCTGCTCAGTATCTTCTTCTTGAATATGCTTCTGGTGCACCAGTCCATTTCTCTTACAAGGAGCTCCACAAGTCAACAAAGGGGTTCAAGGAGAAACTTGGTGATGGGGGAGCAGGTTCTGTTTATAGAGGAGTTCTTGCAAATCAAACTGTTGTTGCAGTTAAGCAACTTGAGGAGGGCACTATTGAGCAGAGTGAGAAAGATTTCAGGATGGAAGTTTCTACCATAATTAGCACCCATCATATGAATCTATATGAGTTCATGAAAAATGGATCTCTTGATAACTTTCTTTTTGTTGATGAACAAGTGTTGAGTTGGGCGTATCGATTCAACATTGCATTGGGTGCTGCTAGGGGCTTGACATATCTTCATGAGGAGTGTAGAAACTGCATTGTCCATTGTGATGTGAAACCTGCAAACATTCTTTTAGATGAGAATTACAATGCAAAAGTCTCAGATTTCGGCCTCGCAAAGCTCTTAATGAGAGGAGCCAGAGGGTATTTAGCTCCTGAATGGCTTGCAAATCTTCCAGTAACTTTCAAATTTGATGTTTACAGTTATGGCATGGTTTTGTTGGAGATAGTGAGTGGTAGAAGGAACTTTGAAATCTCAGAAGAAACAAGTGGAAAAAGGTGTACCATCTGGGCTTATGAAGAGTTTGAGAAAGGTAACATCATGGGAGTAATTGATAGAAGATTGGTAAGCCAAGGAGTGAACTTGGAAGAAGCCAAAAGAGTGCTTCTGGCAAGTTTTTGGTGCATACAGGAGGAGCCATCTGAGAGGCCTACAATGGGCAAAGTTGTGCAAATGCTAGAAGGTGTGATAGATATTGATAGGCCACCAGTTCCAAAATCCATTATAGCAGGATTTTCTAATGGAATCAATGGGAGTGTCTCTGCTATATCCATTATTCCAACCTCATTAGGTCCAACTTCTTCCCCATCATCATCTTTGTTGGCTTCAGCTGGCTTCTTCTACAAGGGACCCTGA 2424 0.4315 MCLETQEHPLFLYFFFFSSVITTITGTTTTTISPRSTLYASNTTQSWSSPNNTFSLRFIPLHPQQSSSPASFIAAIVYSGGSLTIWSVGHGATVDSGGSLRFLSAGNLRFVNGSGSTLWDSGTSNMGVSSAMLHDNGNLVLSNDTGYSVWSSFDNPIDTIVPSQNFTIGMVLRSGLYSFSVLRYGNLTLKWNDSVPYWEQGLELNSSMSRVNFSSPVLGLQSVGILQLSDPNLTAPMVVAYSNDYNEGSDVLRVLKLDGDGNLRIYSSKRGSGIVTVNWVAVADQCEVFGYCGNNAICSYNDSNPICGCPSQNFVMVDPNDSRKGCKRKVRLEDCAGKVAMLQVDNARFLTYPPQFLINPEIFFIGISACRGNCLSSSSCFASTSLSDGTGLCYIKTGNFLSGYQNLAQPSTSYIKVCGPLVPTSPPNSLENARGWKHQKIHSWILAIVILSTFFGFLAFEVGLWLWCCRNSSGFGGFAAQYLLLEYASGAPVHFSYKELHKSTKGFKEKLGDGGAGSVYRGVLANQTVVAVKQLEEGTIEQSEKDFRMEVSTIISTHHMNLYEFMKNGSLDNFLFVDEQVLSWAYRFNIALGAARGLTYLHEECRNCIVHCDVKPANILLDENYNAKVSDFGLAKLLMRGARGYLAPEWLANLPVTFKFDVYSYGMVLLEIVSGRRNFEISEETSGKRCTIWAYEEFEKGNIMGVIDRRLVSQGVNLEEAKRVLLASFWCIQEEPSERPTMGKVVQMLEGVIDIDRPPVPKSIIAGFSNGINGSVSAISIIPTSLGPTSSPSSSLLASAGFFYKGP* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0804 807 PIRSF SRK 3 780 IPR024171 GO:0004674
Lja5g0804 807 Pfam S-locus glycoprotein domain 248 310 IPR000858 GO:0048544
Lja5g0804 807 ProSiteProfiles Bulb-type lectin domain profile. 29 154 IPR001480 -
Lja5g0804 807 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 14 796 - -
Lja5g0804 807 Gene3D Phosphorylase Kinase; domain 1 484 568 - -
Lja5g0804 807 Gene3D Transferase(Phosphotransferase) domain 1 569 757 - -
Lja5g0804 807 Gene3D - 24 154 IPR036426 -
Lja5g0804 807 CDD B_lectin 45 156 IPR001480 -
Lja5g0804 807 PANTHER OS07G0415500 PROTEIN 14 796 - -
Lja5g0804 807 Gene3D - 155 273 IPR036426 -
Lja5g0804 807 SUPERFAMILY Protein kinase-like (PK-like) 488 750 IPR011009 -
Lja5g0804 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Lja5g0804 807 ProSiteProfiles Protein kinase domain profile. 505 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0804 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 201 IPR036426 -
Lja5g0804 807 Pfam D-mannose binding lectin 95 168 IPR001480 -
Lja5g0804 807 SMART blect_4 38 156 IPR001480 -
Lja5g0804 807 Pfam Protein kinase domain 508 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0804 807 SMART serkin_6 505 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0804 Lja-Chr5 7478217 7480723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0804 466 759 Receptor kinase-like Gene Family AT5G20050 37.389 6.71e-65 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lja5g0804 Pkinase 4.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0804 - - gmx:100810753 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0804 5 7478217 7480723 Lja5g0804 5 7478217 7480723 ECH