Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0788 ATGGGGTTACCTTCAACAATATCCTTAGACAGCACCTGGTGGATGTTCACACTTCCAGCCATAGCAACAGGAACAGAAAACCTCCTCAATAATCTCTTTGTGGTGATCCTAATTGCACTTTTCTCCATTGGGTTTCTAACTATGATCCCAAGAGGAGGTGTAGCATGGAGAAACACCAGGACCCAAATGGGACAAATCCCTATACCAGGACCCAAAGGACTTCCCATCTTCGGCATTTTATTCAGCTTGAACCATGGCCTCCCTCACCGTACCCTCGCATCCATGGCTTCCACTGTATCCGCCACCAAACTCATGGCCTTCAGCTTAGGTTCAACCCCTGCAGTTATCACCTCAAATCCTCACACAGCCCGTGAAATCTTGAACTCACCCCACTTCGCAAACCGTCCCGTAAAACAGTCCGCTAAGAGCCTCATGTTCACTCGCGCCATCGGGTTCGCACCCAACGGCGCCTATTGGCGCTCGTTGCGCAGGGTCGCCTCCGCCCACCTCTTCTCTCCACGGCGCATCGCCGCCCATGAGGCCGGGCGAAGGCTTCACTGCGCCGCCATGCTGTACTTTTTTGATTATATTTCTAACAGGTACAACCGAGAAGATAACGGCTGCGAGCTGCATGAGATGGTGAGGGAAGGGTTTGAGCTCTTGGGAGCTTTCAACTGGTCTGATTATGTGCCTTGGATCAGCTTCTTCTATGACCCTTTGCGTGTTCGAGAACGGTGTTCCGCTCTGGCTCCTCGCGTTAAGAGGTTTGTGATGAAGGTTCTAAATGAGCACCGAAGAATTGCTTCATTCAAGGAGCTTTCTGATGGCTCTGACTTTGTGGATGTTCTCCTATCTCTAGAGGGGGATGAGGAGCTCCAAGACGACGACATCATTGCCATTTTATGGGAGATGATATTTCGTGGCACGGACACAACGGCACTTCTTACCGAGTGGGTAATGGCTGAGCTTGTTTTGAACCAAAAAATTCAGACAAGGCTTCGTAAGGAGCTTAACAATGTTTTTGGCAACAACAAAAGTGATGTCACCGACGCTGACTTGGTCAAACTTCCATACCTCGAAGCCATTGTGAAGGAAACACTTCGAGTCCATCCAATTGGGCCCCTCCTCTCATGGGCTCGTCTTTCCACGTCAGATGTCCAGCTCAGCAACGGGATGGTGGTCCCGGCCAACACCACAACGATGGTGAACATGTGGGCCATAACGCACGACCCTAGCAGGTTCCTGAAGAGTGAAGGAGGGGTTGAAGTGGATGTGAGAGGCGGTGACATCAGGCTTGCACCGTTTGGAGCTGGGCGGAGGGTTTGCCCTGGTAAGAACTTGGGTCTTGTGACCGTGAGCCTTTGGGTGGCTAGGTTGGTTCACAAGTTTCAATGGCTACAAGACATAGCTAACCCTATTGACCTTACTGAGGTGCTCAAGCTGTCTTGTGAGATGAAGAACCCCCTCAAAGTTGTGGCTATTCCTAGGGCTGGTTGA 1497 0.5104 MGLPSTISLDSTWWMFTLPAIATGTENLLNNLFVVILIALFSIGFLTMIPRGGVAWRNTRTQMGQIPIPGPKGLPIFGILFSLNHGLPHRTLASMASTVSATKLMAFSLGSTPAVITSNPHTAREILNSPHFANRPVKQSAKSLMFTRAIGFAPNGAYWRSLRRVASAHLFSPRRIAAHEAGRRLHCAAMLYFFDYISNRYNREDNGCELHEMVREGFELLGAFNWSDYVPWISFFYDPLRVRERCSALAPRVKRFVMKVLNEHRRIASFKELSDGSDFVDVLLSLEGDEELQDDDIIAILWEMIFRGTDTTALLTEWVMAELVLNQKIQTRLRKELNNVFGNNKSDVTDADLVKLPYLEAIVKETLRVHPIGPLLSWARLSTSDVQLSNGMVVPANTTTMVNMWAITHDPSRFLKSEGGVEVDVRGGDIRLAPFGAGRRVCPGKNLGLVTVSLWVARLVHKFQWLQDIANPIDLTEVLKLSCEMKNPLKVVAIPRAG* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0788 498 SUPERFAMILY Cytochrome P450 68 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0788 498 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0788 498 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0788 498 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0788 498 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0788 498 PANTHER CYTOCHROME P450 78A7-RELATED 201 497 - -
Lja5g0788 498 PANTHER CYTOCHROME P450 FAMILY 78 PROTEIN 6 192 - -
Lja5g0788 498 PANTHER CYTOCHROME P450 FAMILY 78 PROTEIN 201 497 - -
Lja5g0788 498 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0788 498 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0788 498 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0788 498 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0788 498 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0788 498 Pfam Cytochrome P450 69 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0788 498 Pfam Cytochrome P450 199 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0788 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Lja5g0788 498 PANTHER CYTOCHROME P450 78A7-RELATED 6 192 - -
Lja5g0788 498 Gene3D Cytochrome P450 55 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0788 Lja-Chr5 7281872 7284954 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0788 1 492 Cytochrome P450 AT5G09970 57.249 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0788 K20619 - qsu:112034410 668.692