Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0786 ATGGAGATTCACATTTTGCTATTATTTGTCACGCTCTCCCTAGCCACAATTCGGTTCTTTTTGAACCGCCACCGCAAAAAGAACCAGCCACCCGAAATCCTCCAAAAGAACGACCAGGCCTTCGCCAACCGCCCCATTCCGGATTCCCTGACCGCTCAGCCCAACGTCGACGACACCATCTCCTGGGCCGCCGGCGACCCACTGTGGAAAAACCGCCGCCGGTTCTGCTCCACCCGTCTATTCAGCACCCAACGCCTCGACCTCCTCCAGCACCTCCGGCATCGGAAAGCGCAGCAACTGGTGCAACACCTCCGTAAAAAAGCTTCAACCAGAACGGCGGTGGACATCGGCGCGCTAGCGTTCGCGACGATGCTGAACCTTCTGGCGAACACGGTGTTCTCGGAGGATCTGGTGGACTCGGAGTTCGAGAGTGCTGGTGAGTTCAAGGAGCTGGCATGGAGGATCATGGAGGATTCCGGGAGGTTGAACCTGTCGGATTATTTTCCGGTGCTGAAGCGGTTTGACTTGCAGGGTGTGAAGAGGCACGTGAAGGTTTCCTATGTGAGGTTGCATGAGATCTTTGGTGAGGTTATTGGGCGGCGCGTGAGAGATAGAGAAAGCTCGCGTGGTGCAAGTAGTAATGGTGATTTCCTAGATGTGTTGCTTGATCATTGTGAACAAGAGGATGGTTCTATTTTCACTGTTGAAAGCATCAGGACAATGATTGTGGATATGTTCATTGCTGGAAGTGATACTTCAGGATCAACAACAGAGTGGGCAATGTCAGAGCTTCTACGCAACTCAGAAGTAATGCAAAAGGCGAGAAAGGAGCTGATCCAAGTGATTGGAACCTCCAATGAAGTAACAGAATCGGATATTCCTAGACTCCCATACATCCAAGCAATAGTGAAAGAGACTCTGAGGCTTCATCCACCAGTGCCCCTTCTATTACCCTATGTTGCAGGAAATGATGTTGAGATAAACGGGTACACCATTCACAAAGGAGACCAGGTTATGATAAACGCATGGTCCATTGGTAGAGACCCGGAGTTATGGGATGATCCATTGACATTTGAGCCTGAAAGGTTTCTCAAATCCAACATAGATTTCAGAGGTAACTTTGAATATTTGCCTTTTGGTAGTGGAAGGAGAGTTTGTCCTGGTCAGCCACTTGCTATTAGGATGGTTAGTTTAATGGTGGCTGTGTTGGTGCATTCTTTTGAGTGGGAGCTTCCTCAGGGCGTCACTGCTGAAACGCTTGACATGAGTGAGAAATATGGGATAGCATTGACGAAGCTCACTCCTCTTTCTGCTATTCCAATACCAATGTCAATATAA 1338 0.4918 MEIHILLLFVTLSLATIRFFLNRHRKKNQPPEILQKNDQAFANRPIPDSLTAQPNVDDTISWAAGDPLWKNRRRFCSTRLFSTQRLDLLQHLRHRKAQQLVQHLRKKASTRTAVDIGALAFATMLNLLANTVFSEDLVDSEFESAGEFKELAWRIMEDSGRLNLSDYFPVLKRFDLQGVKRHVKVSYVRLHEIFGEVIGRRVRDRESSRGASSNGDFLDVLLDHCEQEDGSIFTVESIRTMIVDMFIAGSDTSGSTTEWAMSELLRNSEVMQKARKELIQVIGTSNEVTESDIPRLPYIQAIVKETLRLHPPVPLLLPYVAGNDVEINGYTIHKGDQVMINAWSIGRDPELWDDPLTFEPERFLKSNIDFRGNFEYLPFGSGRRVCPGQPLAIRMVSLMVAVLVHSFEWELPQGVTAETLDMSEKYGIALTKLTPLSAIPIPMSI* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0786 445 Gene3D Cytochrome P450 27 436 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 PRINTS E-class P450 group I signature 386 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 PRINTS E-class P450 group I signature 257 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 PRINTS E-class P450 group I signature 29 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 PRINTS E-class P450 group I signature 237 254 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 PRINTS E-class P450 group I signature 341 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 PRINTS E-class P450 group I signature 376 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 PRINTS E-class P450 group I signature 300 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 PANTHER GERANIOL 8-HYDROXYLASE-LIKE 31 438 - -
Lja5g0786 445 PANTHER STEROID 21-HYDROXYLASE-RELATED 31 438 - -
Lja5g0786 445 Pfam Cytochrome P450 32 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 SUPERFAMILY Cytochrome P450 31 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 PRINTS P450 superfamily signature 301 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 PRINTS P450 superfamily signature 248 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 PRINTS P450 superfamily signature 377 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0786 445 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 379 388 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0786 Lja-Chr5 7260099 7262034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0786 32 441 Cytochrome P450 AT2G45550 40.821 5.97e-111 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0786 - - vra:106769993 608.601