Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0767 ATGTCCAAGGTGCTTTGTGTCACTGGAGCTAGCGGCGCCATCGGATCATGGGTGGTTAAGCTCCTCCTCGACCGTGGCTACACCGTCCACGCCACCGTCCAAGATCTCAAGGATGAAAAAGAGACCAAACATCTGGAGGCAATGGAAGGAGCTAAGGGCCGTCTCCGCCTCTTCGAGATGGACCTTCTTGACACCAACTCCATCGCTACCACCGTGAAGGGTTGTAATGGCGTCATACACCTTGCCTGTCCTAATGTCATTGGCGAAGTCACAGATCCAGAGAAACAAATATTGGAACCGGCAATAAAAGGGACAGTAAATGTTCTGAAGGCGGCGAAGGAAGCAGGGGCGGAGCGGGTGGTGGCGACGTCGTCTATCTCCGCCATCACGCCGAGTCCGAATTGGCCAGCTGATAAGATCAAGGGAGAGGACTGTTGGACGGATCTTGAATACTGCAAGGAAAAGGGGTTATACTATCCCATTGCGAAGACACTAGCTGAAAAAGCAGGCTGGGAATTTGCAAAGGAAACAGGCTTCGATGTGGTGATGATAAATCCTGGCACTGCCTTGGGCTCTCTTATTTCCCCACGAATCAATTCCAGCATGGCTGTGCTTGCTGGCGTTCTCAAAGGTGATAAAGAGACATACGAGGACTTCTTTATGGGAATGGCTCACTTTAAAGATATTGCCTTGGCCCATATTTTGGCATTTGAGAACAAGAAGGCAGCTGGAAGGCACTTATGTGTGGAAGCTATTCGTCACTATAGTGATTTTGTGGCAATGGTTGCTGACTTATACCCTGAATATAATGTGGTTAGGGTGACAAAGGATACCCAACCAGAGTTGTTGAGAGCAAATAATGCATCCAAGAAGCTGATTGATTTAGGCAAGAATGGTTCCCTCTCTCCTCCGTACCGGTGCTCTTCCGCCGCAAACCGTCCTCTTCAACGGCAACCACCGTGGAACTCAAGTTTCAAGACTCACGAAATCAACAATCTGGAACCCCAACCTGGGTGTGCAGGCCGATCCCAAAGCCACCAATCTCTTGGTCGTCGTCGCTCCGCCAACCTCCTCCACCTTCCTCTCATCCTATGA 1095 0.5023 MSKVLCVTGASGAIGSWVVKLLLDRGYTVHATVQDLKDEKETKHLEAMEGAKGRLRLFEMDLLDTNSIATTVKGCNGVIHLACPNVIGEVTDPEKQILEPAIKGTVNVLKAAKEAGAERVVATSSISAITPSPNWPADKIKGEDCWTDLEYCKEKGLYYPIAKTLAEKAGWEFAKETGFDVVMINPGTALGSLISPRINSSMAVLAGVLKGDKETYEDFFMGMAHFKDIALAHILAFENKKAAGRHLCVEAIRHYSDFVAMVADLYPEYNVVRVTKDTQPELLRANNASKKLIDLGKNGSLSPPYRCSSAANRPLQRQPPWNSSFKTHEINNLEPQPGCAGRSQSHQSLGRRRSANLLHLPLIL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0767 364 MobiDBLite consensus disorder prediction 332 351 - -
Lja5g0767 364 Gene3D - 1 301 - -
Lja5g0767 364 CDD FR_SDR_e 6 296 - -
Lja5g0767 364 Pfam NAD dependent epimerase/dehydratase family 6 239 IPR001509 -
Lja5g0767 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 277 IPR036291 -
Lja5g0767 364 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 297 - -
Lja5g0767 364 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0767 Lja-Chr5 7105993 7117734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0767 3 296 Monolignol Biosynthesis Gene Families AT5G58490 64.966 1.49e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0767 - - lja:Lj0g3v0250699.2 560.836