Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0763 ATGGGAAATACTGTTACCACCTTGTTATTTTCCTTGTTCTTCTTCTTCTGCCTTACCCTAACAAAGATTGAAGTGATAACTTGTCTCTCTTCTGATGGACAAGCCTTGCTTTCTCTTGTGTCTGGAACTGCAAAATCATCACCAAGACATTCTGTTCTCTCCTCATGGAACCCATCAAGCTCAACACCATGTTCATGGAAAGGCATTACTTGCTCCCCACAAGGTAGAGTAATTTCTCTCTCTATCCCAGACACTTTCCTCAACATTACCTCTTTACCCCCTCAGCTATCCTCTTTGTCAATGCTGCAACTTCTCAACCTCTCTTCCACCAATGTCTCTGGCTCAATCCCACCATCTTTTGGTGAACTCACCCATCTTGAGCTTCTAGACCTCTCTTCCAACTCTCTCACTGGTTCCATTCCTGCTGAGCTTGGAAAACTCTCTTCACTTCAGTTCCTTTTCTTGAACTCCAACAGATTGAGTGGGAATATTCCTCAAGATCTTTCAAACCTTACCTCACTTGAAGTTCTCTGCCTCCAAGACAATCTTCTCAATGGATCAATACCATCACAGTTAGGCTCTTTAACATCTTTGCAGCAGTTCAGGATTGGGGGTAATCAATATCTCACTGGACAAATCCCATCTCAGTTAGGGTTTCTTACCAACCTCACAATATTTGGTGCTGCCTCCACTGGACTTTCTGGTGCCATTCCCTCCACATTTGGGAACTTGATCAATCTCCAAACTTTAGCACTTTATGATACTGATGTTTCTGGTTCAATACCACCAGAACTTGGGTTTTGCTCTGAGTTGAGGAATTTGTATTTGCACATGAGTAAGCTCACTGGCTCTATCCCTCCTCAATTGGGTAAGTTGCAGAAACTCACAAGCTTGCTTCTTTGGGGGAATTCATTATCTGGGCCAATCCCACCTGAGATTTCTAACTGTTCATCACTTGTTATATTTGATGCCTCTTCTAATGAACTTTCTGGTGAGCTACCTGGGGATTTTGGGAAGCTAATGTTTCTGCAACAGCTTCATCTTTCTGACAATTCACTCTCAGGTCAAGTACCATGGCAGTTGAGCAACTGCACTAGCCTTGCCATTGTTCAGCTTGACAAGAATCAATTTTCAGGTTCAATTCCATGGCAGGTTGGAAAATTGAAACTCTTGCAGAGTTTTTTCTTGTGGGGAAATTCAGTTTCTGGAACAATACCATCCTCTTTTGGGAACTGCACAGAGCTCTATTCACTTGACCTTTCAGGGAACAAGCTAACAGGATCCATCCCAGAGGAAATTTTCAGGTTGAAGAAGCTGAGTAAGCTTCTGCTTCTTGGGAATTCTTTAACAGGAAGGTTGCCACCAAGTATTGCAAATTGTCAATCTTTAGTGAGGCTAAGGGTTGGAGAAAACCAGCTTTCAGGACAGATTCCTAAAGAGATAGGCCAGTTGCAGAATCTAGTGTTTCTTGACTTGTACATGAATCATTTCTCTGGAAACTTGCCAGTGGAGATTGCCAACATCACAGTTCTTGAGCTCTTAGATGTGCATAACAACTACCTCACTGGGGAAATTCCATCTGTGTTTGGGGGACTTGAGAATTTGGAGCAGCTTGATCTCAGTCGAAACAGTTTGACAGGTGAAATACCATGGAGCTTTGGGAATCTCAGTTATTTGAACAAACTCATCCTGAACAATAATTTACTGACAGGGTCAATTCCAAAATCCATTAGATATTTGCAGAAGCTAACTCTGCTGGATTTGAGTTATAACTACTTTTCTGGTGGCATACCTCCTGAGATTGGTTATGTTACAAGCTTAACCATCAGTTTGGACTTGAGCTCAAATGCATTTACAGGAGAAATCCCAGATTCAATGTCTTCTTTGACACAGTTACAATCAATTGATCTTTCTCATAATGCGCTATATGGAGGAATTAAGGTTCTAGGATCTCTCACTAGTCTCACTTTCCTCAATATCTCTTACAACAACTTCTCAGGTCCTATCCCGGTAACTACATTCTTCAGAACTCTATCTTCCAATTCATATCTTCATAACCTGAATCTATGCCAGTCCAGTGATGGAACTACGTGTTCTTCAAGAGTGATTCGAAAAAATGGCGTAGAATCTGTAAAAACCATAGTTTTGGTCATGGTAATTCTAGCCTCAGTTGCCGCAATTGTCATTGCATCGTGGATCCTAGTAGCTCGCAATTACAGATATAATGTTGAAAGAACTTTGGGGATATCGTCCTTGACATCAGGAGTTGAGGATTTCTCTTACCCTTGGACTTTCATTCCATTTCAAAAACTGAACTTCAGCATAGATAATATCCTGGATTGCTTGAAGGATGAGAATGTGATTGGAAAGGGTTGTTCTGGTGTTGTGTACAAAGCTGAGATGCCAAATGGGGAGTTGATAGCAGTGAAGAAGCTTTGGAAAGCAAACAAAACTGAGGAAACGATTGATTCTTTCGCTGCAGAGATTCAGATTCTCGGGTACATTCGGCATAGGAACATTGTGAGGCTCATAGGTTACTGTTCTAACAGGAGTGTTAAGCTCCTGCTCTATAACTTCATCCCAAATGGCAATCTACGACAGCTTTTGGAAGGGAACAGGAACCTAGATTGGGAGACTAGGTACAAGATTGCTGTTGGATCAGCTCAGGGTCTAGCTTACCTTCACCATGATTGTGTCCCTGCAATTCTCCATAGAGATGTTAAGTGCAATAACATACTTCTAGATTCCAAATTTGAGGCATGTCTTGCTGATTTCGGTCTTGCAAAGCTAATGAGTTCACCAAATTATCATCAAGCAATGTCCAGGGTTGCTGGTTCCTATGGCTATATTGCACCAGAGTATGGCTACTCCATGAACATAACAGAGAAGAGTGATGTCTACAGTTATGGAGTGGTTTTACTAGAGATATTAAGCGGGCGCAGCGCAGTAGAATCTCATTTCGGAGATGGACAACACATAGTTGAGTGGGTGAAGAGGAAGATGGGAAGCTTTGAACCAGCTGTGTCAATACTAGACTCAAAGCTCCAAAGTCTACCAGATCAAATGGTTCAAGAGATGCTCCAAACACTTGGAATTGCCATGTTTTGTGTGAACTCTTCTCCGACAGAACGCCCCACCATGAAGGAAGTGGTTGCTCTACTCATGGAGGTGAAGAGCCAGCCAGAGGAAATGGGAAAGACCTCACAACCTCTAATAAAGCAGTCCTCAACTCAAAGCTGA 3240 0.4219 MGNTVTTLLFSLFFFFCLTLTKIEVITCLSSDGQALLSLVSGTAKSSPRHSVLSSWNPSSSTPCSWKGITCSPQGRVISLSIPDTFLNITSLPPQLSSLSMLQLLNLSSTNVSGSIPPSFGELTHLELLDLSSNSLTGSIPAELGKLSSLQFLFLNSNRLSGNIPQDLSNLTSLEVLCLQDNLLNGSIPSQLGSLTSLQQFRIGGNQYLTGQIPSQLGFLTNLTIFGAASTGLSGAIPSTFGNLINLQTLALYDTDVSGSIPPELGFCSELRNLYLHMSKLTGSIPPQLGKLQKLTSLLLWGNSLSGPIPPEISNCSSLVIFDASSNELSGELPGDFGKLMFLQQLHLSDNSLSGQVPWQLSNCTSLAIVQLDKNQFSGSIPWQVGKLKLLQSFFLWGNSVSGTIPSSFGNCTELYSLDLSGNKLTGSIPEEIFRLKKLSKLLLLGNSLTGRLPPSIANCQSLVRLRVGENQLSGQIPKEIGQLQNLVFLDLYMNHFSGNLPVEIANITVLELLDVHNNYLTGEIPSVFGGLENLEQLDLSRNSLTGEIPWSFGNLSYLNKLILNNNLLTGSIPKSIRYLQKLTLLDLSYNYFSGGIPPEIGYVTSLTISLDLSSNAFTGEIPDSMSSLTQLQSIDLSHNALYGGIKVLGSLTSLTFLNISYNNFSGPIPVTTFFRTLSSNSYLHNLNLCQSSDGTTCSSRVIRKNGVESVKTIVLVMVILASVAAIVIASWILVARNYRYNVERTLGISSLTSGVEDFSYPWTFIPFQKLNFSIDNILDCLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKANKTEETIDSFAAEIQILGYIRHRNIVRLIGYCSNRSVKLLLYNFIPNGNLRQLLEGNRNLDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKFEACLADFGLAKLMSSPNYHQAMSRVAGSYGYIAPEYGYSMNITEKSDVYSYGVVLLEILSGRSAVESHFGDGQHIVEWVKRKMGSFEPAVSILDSKLQSLPDQMVQEMLQTLGIAMFCVNSSPTERPTMKEVVALLMEVKSQPEEMGKTSQPLIKQSSTQS* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0763 1079 PRINTS Leucine-rich repeat signature 126 139 - -
Lja5g0763 1079 PRINTS Leucine-rich repeat signature 532 545 - -
Lja5g0763 1079 Gene3D Ribonuclease Inhibitor 209 449 IPR032675 -
Lja5g0763 1079 Gene3D Phosphorylase Kinase; domain 1 759 859 - -
Lja5g0763 1079 Gene3D Ribonuclease Inhibitor 450 700 IPR032675 -
Lja5g0763 1079 MobiDBLite consensus disorder prediction 1059 1079 - -
Lja5g0763 1079 ProSitePatterns Protein kinases ATP-binding region signature. 788 811 IPR017441 GO:0005524
Lja5g0763 1079 ProSitePatterns Serine/Threonine protein kinases active-site signature. 902 914 IPR008271 GO:0004672|GO:0006468
Lja5g0763 1079 PANTHER UNNAMED PRODUCT 1 1075 - -
Lja5g0763 1079 SUPERFAMILY RNI-like 404 692 - -
Lja5g0763 1079 MobiDBLite consensus disorder prediction 1062 1079 - -
Lja5g0763 1079 SUPERFAMILY Protein kinase-like (PK-like) 768 1054 IPR011009 -
Lja5g0763 1079 ProSiteProfiles Protein kinase domain profile. 782 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0763 1079 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
Lja5g0763 1079 Gene3D Transferase(Phosphotransferase) domain 1 860 1076 - -
Lja5g0763 1079 SMART LRR_typ_2 532 555 IPR003591 -
Lja5g0763 1079 SMART LRR_typ_2 147 170 IPR003591 -
Lja5g0763 1079 SMART LRR_typ_2 580 604 IPR003591 -
Lja5g0763 1079 SMART LRR_typ_2 123 146 IPR003591 -
Lja5g0763 1079 SMART LRR_typ_2 629 659 IPR003591 -
Lja5g0763 1079 SMART LRR_typ_2 412 436 IPR003591 -
Lja5g0763 1079 SMART LRR_typ_2 171 195 IPR003591 -
Lja5g0763 1079 SMART LRR_typ_2 292 316 IPR003591 -
Lja5g0763 1079 Gene3D Ribonuclease Inhibitor 28 208 IPR032675 -
Lja5g0763 1079 SMART serkin_6 782 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0763 1079 PANTHER - 1 1075 - -
Lja5g0763 1079 Pfam Leucine rich repeat 391 449 IPR001611 GO:0005515
Lja5g0763 1079 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Lja5g0763 1079 SUPERFAMILY RNI-like 105 494 - -
Lja5g0763 1079 Pfam Leucine Rich Repeat 534 556 IPR001611 GO:0005515
Lja5g0763 1079 Pfam Protein kinase domain 784 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0763 Lja-Chr5 7067018 7071100 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0763 26 1073 Receptor kinase-like Gene Family AT5G56040 45.216 0.0 864
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja5g0763 Pkinase 6.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0763 - - ccaj:109812175 1777.3