Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0759 ATGCCACCAGCTGTGGAAGAAACTGAGATTGGGACTCCAACATCGATGCCGGCTACTCCAGAAACACCGGGAGGGCCGCTGTTCACGTCGCTCCGAATCGACTCGCTGGACGCTCGTGGGTCGTTCACGGGGCCTCGGTGCATGTGTCTGCCGCCGAAGGCTCATACGTGCTTGACTGATTTCTCTGCTGGTATTGGGATTGGAATTCCGAGTGTGCCTCTTACTCAAAAGATTCTAGCAGAGTTTGTGGGGACTTTCATACTGATATTTGCAGCAACTGCTGGACCAATAGTGAACAACAAGTACGATGGAGCAGAGGGTCTGATGGGAAATGCAGCTACTGCAGGATTAACAGTGATGTTCATCATCCTCTCCATTGGCCACATCTCTGGTGCACACCTCAACCCTTCCCTCACCATCGCCTTCGCGGCATTCCGCCATTTCCCGTGGTCTCAAGTGCCGGCATACATAGCAGCACAAGTCTCTGCCTCCATCTGTGCCTGTTTTGCTCTCAAATATGTTTACCATCCTTTCTTGTCTGGTGGAGTCACTGTCCCTACTGTCGACATTGGACAAGCTTTTGCAACTGAGTTTATCATCACTTTTATTCTCATGTTTGTGGTTACTGCTGTTGCTACTGATAGTCGCGCGGTTGGTGAATTGGCAGGTATTGCTGTTGGTGCTACAGTTTTGCTCAACATTCTCATATCAGGGCCAACAAGTGGAGGTTCCATGAATCCGGTGCGCACCTTGGGACCAGCCGTTGCAGCAGGAAATTACAAGCATATCTGGATATATTTGGTGGCTCCAACACTTGGTGCTCTTGCTGGTGCTGGTGTTTACACCCTTGTCAAGCTGCGTGATGATGGTGCTGGACCACCACAACAGGTTAGGAGCTTCCGTCGCTAG 909 0.5094 MPPAVEETEIGTPTSMPATPETPGGPLFTSLRIDSLDARGSFTGPRCMCLPPKAHTCLTDFSAGIGIGIPSVPLTQKILAEFVGTFILIFAATAGPIVNNKYDGAEGLMGNAATAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWSQVPAYIAAQVSASICACFALKYVYHPFLSGGVTVPTVDIGQAFATEFIITFILMFVVTAVATDSRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHIWIYLVAPTLGALAGAGVYTLVKLRDDGAGPPQQVRSFRR* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0759 302 MobiDBLite consensus disorder prediction 1 24 - -
Lja5g0759 302 Pfam Major intrinsic protein 71 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lja5g0759 302 Gene3D Glycerol uptake facilitator protein. 71 293 IPR023271 -
Lja5g0759 302 PANTHER AQUAPORIN NIP2-1 11 299 IPR034294 -
Lja5g0759 302 SUPERFAMILY Aquaporin-like 73 287 IPR023271 -
Lja5g0759 302 ProSitePatterns MIP family signature. 133 141 IPR022357 -
Lja5g0759 302 CDD MIP 76 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lja5g0759 302 PANTHER AQUAPORIN NIP5-1-RELATED 11 299 - -
Lja5g0759 302 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lja5g0759 302 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lja5g0759 302 PRINTS Major intrinsic protein family signature 152 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lja5g0759 302 PRINTS Major intrinsic protein family signature 196 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lja5g0759 302 PRINTS Major intrinsic protein family signature 227 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lja5g0759 302 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0759 Lja-Chr5 7005827 7013619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0759 27 302 Major Intrinsic Protein MIP AT4G10380 71.277 1.91e-139 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0759 K09874 - gmx:100775229 494.967