Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja5g0745 | ATGGGGTGTGTTCAGGCCAAGGCAATGGAAGAAGGTGGTGGTTCTGGCTACAGGGGTATTGACAGGTTGAAAATGGAAAGTGGGTATGTTGCAAGTTCTGATTTTGTTGCTCATAGGAGATCCACTGGTCAAAGACATGATGAAGAACCCAGAAAGCAGAAAGCTGAGCCTGGTGCTGGCAATGGTGAAAGGAGAGAGCTTGCTGATGTGGGTGGTGTGGGGAAGAGAGATGCTGATGTGGGTCGTGGGAGTAAGAAGCTGCCAAATAAGTCTTTTGAGGATGAGATGGTTGATGGTTGGCCTAAATGGTTTGTTGAGAATGTTCCTGTACAAGCGTTGGCTGGCTTGGTTCCCAAGAGTGCTGAATCATACAAAATGATTGATAAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCTCTAGATCGAGAGACAGGAGAAATTGTCGCCCTTAAGAAAGTCCGCTTCAATACATCAGAACCTGAAAGCATTAAATTCATGGCTAGAGAAATTATGATATTACAGAAATTGGATCATCCCAATGTAGTAAAACTCAAAGGCTTAGCCACTTCAAGAATGCATTACAGTATATATCTAGTTTTTGAGTTCATGCCAACAGATTTGGCCAGAGTTATTACTCGGTCCGAAGAGAGACTAACTGAACCGCAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTGCGCCATTGCCATGATAGGGGAATTCTGCATCGAGATATAAAGGGGTCAAACCTTTTGATTGATCAAAATGGGATGCTTAAGATCGCAGATTTCGGGCTTGCCAATCATTATGGTCCAAACCATGACCAGCCTCTCACAAACCGGGTTGTGACTCTGTGGTACAGAGCTCCTGAGTTGTTGTTAGGTTCCACAGATTATGGAGTTGGTATAGATCTATGGAGTGCTGGATGTCTCTTGGCAGAAATGTTTAAAGGAGTTCCAATCATGCCTGGTAAAACAGAGGTTGAGCAACTGCATAGAATTTTCAGGCTATGTGGCACACCATCAGAGGAGTATTGGAGAAAATTAAAACTTTCGACAACTTTTAGACCACCAAAGTCTTATAGACCCAGCCTTGTAGAAACTTTCAGGGATCTCCCTCCATCTTCTTTAGGTCTCTTATGTACTCTTCTTGCTTTGGATCCTGCATTTCGGGGCAGTGCATCTAAAGCTCTTAACAATCAGTTTTTCTTTACAAGCCCCTTGGCATGTGATCTCTCTGGTCTTCCTGTGATCTCCAAACAAGAAGATGAGCATATTCGAGCCAATGAACAGATCAAGTATATGAACTCTAAAATCAGGCGTTCTCGCACATATATGGAGCGTCGCAAGAATTTAGCATCTAATAAGACAATAGAACATACTGTATCATCTAAAGAGGATATCAGAAGAAATGATGAGCCTGAAACTTACGTTCCAAGTGAAGAACCAGGGAGCACAACAAGTAGTACCTCATCTAGTGCAAACCCATCTGGGGCTAAGGATCACTCACCTTTATTTCCCCCTCTACTCCGGCCTTCAGATCAAAAGTTGCCCCCGAAAATCCATCGCCATGCTTATGTTGGTGGGAAAAGCATCAAGAACCTTCCCCCATCATCCAAGTCAAAACCAAATGCAGCCAAGAAAGATGACAGCAGATACAGACCAGACCAGGTTTTCAGGTCTGCTTCCACCAGAGAATTTAGAAACTCAAAACGGGAACAGCATTTACTCTTTGAAATTGATGATTAG | 1758 | 0.4323 | MGCVQAKAMEEGGGSGYRGIDRLKMESGYVASSDFVAHRRSTGQRHDEEPRKQKAEPGAGNGERRELADVGGVGKRDADVGRGSKKLPNKSFEDEMVDGWPKWFVENVPVQALAGLVPKSAESYKMIDKVGQGTYSNVYKALDRETGEIVALKKVRFNTSEPESIKFMAREIMILQKLDHPNVVKLKGLATSRMHYSIYLVFEFMPTDLARVITRSEERLTEPQVKCYMHQLLSGLRHCHDRGILHRDIKGSNLLIDQNGMLKIADFGLANHYGPNHDQPLTNRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFKGVPIMPGKTEVEQLHRIFRLCGTPSEEYWRKLKLSTTFRPPKSYRPSLVETFRDLPPSSLGLLCTLLALDPAFRGSASKALNNQFFFTSPLACDLSGLPVISKQEDEHIRANEQIKYMNSKIRRSRTYMERRKNLASNKTIEHTVSSKEDIRRNDEPETYVPSEEPGSTTSSTSSSANPSGAKDHSPLFPPLLRPSDQKLPPKIHRHAYVGGKSIKNLPPSSKSKPNAAKKDDSRYRPDQVFRSASTREFRNSKREQHLLFEIDD* | 586 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja5g0745 | 585 | SUPERFAMILY | Protein kinase-like (PK-like) | 119 | 410 | IPR011009 | - | |
Lja5g0745 | 585 | Gene3D | Transferase(Phosphotransferase) domain 1 | 207 | 447 | - | - | |
Lja5g0745 | 585 | MobiDBLite | consensus disorder prediction | 546 | 571 | - | - | |
Lja5g0745 | 585 | MobiDBLite | consensus disorder prediction | 453 | 571 | - | - | |
Lja5g0745 | 585 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 244 | 256 | IPR008271 | GO:0004672|GO:0006468 | |
Lja5g0745 | 585 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 550 | - | - | |
Lja5g0745 | 585 | ProSiteProfiles | Protein kinase domain profile. | 124 | 406 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lja5g0745 | 585 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Lja5g0745 | 585 | ProSitePatterns | Protein kinases ATP-binding region signature. | 130 | 153 | IPR017441 | GO:0005524 | |
Lja5g0745 | 585 | SMART | serkin_6 | 124 | 406 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lja5g0745 | 585 | MobiDBLite | consensus disorder prediction | 34 | 90 | - | - | |
Lja5g0745 | 585 | Gene3D | Phosphorylase Kinase; domain 1 | 116 | 206 | - | - | |
Lja5g0745 | 585 | Pfam | Protein kinase domain | 124 | 406 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lja5g0745 | 585 | PANTHER | CYCLIN-DEPENDENT KINASE | 1 | 550 | - | - | |
Lja5g0745 | 585 | MobiDBLite | consensus disorder prediction | 483 | 502 | - | - | |
Lja5g0745 | 585 | MobiDBLite | consensus disorder prediction | 39 | 90 | - | - | |
Lja5g0745 | 585 | MobiDBLite | consensus disorder prediction | 453 | 480 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja5g0745 | Lja-Chr5 | 6851289 | 6856103 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja5g0745 | 119 | 441 | Core Cell Cycle Gene Families | AT5G10270 | 45.748 | 1.41e-95 | 300 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Lja5g0745 | Pkinase | 3e-68 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja5g0745 | K08819 | - | gmx:100776854 | 845.499 |