LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja5g0730	ATGGCGTCGTCGAAGATGATGATGTCGTCTTCCAAATCATTGGATCATCAACAACCCTCTTCTCCTCCTCCTTCTTCCATGCCCCAATTCACCACCACCAACTTCATCGACCACGCCGATTCCACTCTCACCGATCCCTACGTCCCCAGAACCGTCGACGACGTCTGGCAGGAGATCATCGCCGGCGACCACCACCAGTGCAAGGAGGAGATCCCCGACGAGATGATGACTCTCGAGGATTTCCTTGTTAAGGCCGGCGCAGTCGACGGCGACGACGAAGATGATGAGGTCAAGATGTCTATGCCTCTGACTGAGAGGCTCAGCGGCGTGTTTTCGCTTGATGGTTCTTCGTTTCAGGGGATGGAGGGTGTTGAAGGTGGGTCGGCGTCGGTGGGTGGGTTTGGGAATGGGGTTGAGGTGGTTGAAGGAACGAGAGGGAAGAGGGGGAGGCCTGTTGTGGAGAATTTGGATAAGGCTGCGCAGCAGAGACAGAGGAGGATGATCAAGAACAGAGAATCAGCTGCTAGGTCTAGGGAACGCAAGCAGGCTTACCAAGTTGAATTGGAGTCCTTGGCGGTGAAGCTAGAGGAGGAAAATGACAAGTTGTTGAAGGAAAAGGCTGAGAGAACAAAGGAGAGGTTCAAACAGGTACTGATTTCGGCGATTGTTAGTTGTGTTGGGCCTTTCGGTAAAAATATTTATGGTGGATTAATTCACATAATCTCTAGAAGAATTTCTTTCCAATTTGATACTGTAGCTGAAGGTTACTTGAAACTGATTAATGTGTTCAGTAAATATTCCTTCTAG	807	0.4981	MASSKMMMSSSKSLDHQQPSSPPPSSMPQFTTTNFIDHADSTLTDPYVPRTVDDVWQEIIAGDHHQCKEEIPDEMMTLEDFLVKAGAVDGDDEDDEVKMSMPLTERLSGVFSLDGSSFQGMEGVEGGSASVGGFGNGVEVVEGTRGKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKERFKQVLISAIVSCVGPFGKNIYGGLIHIISRRISFQFDTVAEGYLKLINVFSKYSF*	269

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja5g0730	268	Gene3D	-	160	216	-	-
	Lja5g0730	268	Coils	Coil	181	213	-	-
	Lja5g0730	268	MobiDBLite	consensus disorder prediction	1	20	-	-
	Lja5g0730	268	Pfam	bZIP transcription factor	160	213	IPR004827	GO:0003700\|GO:0006355
	Lja5g0730	268	MobiDBLite	consensus disorder prediction	1	32	-	-
	Lja5g0730	268	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	160	212	IPR004827	GO:0003700\|GO:0006355
	Lja5g0730	268	PANTHER	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	39	223	IPR043452	GO:0003700\|GO:0045893
	Lja5g0730	268	CDD	bZIP_plant_BZIP46	162	208	-	-
	Lja5g0730	268	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	165	180	IPR004827	GO:0003700\|GO:0006355
	Lja5g0730	268	PANTHER	BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR	39	223	-	-
	Lja5g0730	268	SUPERFAMILY	Leucine zipper domain	162	213	IPR046347	GO:0003700\|GO:0006355
	Lja5g0730	268	SMART	brlzneu	158	222	IPR004827	GO:0003700\|GO:0006355

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja5g0730	20	218	bZIP Transcription Factor Family	AT5G44080	48.571	7.38e-50	165

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Lja5g0730		bZIP_1	1.6e-12	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja5g0730	K14432		-	gmx:100808917	218.779