Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0711 ATGGCATCTGATCATTCATCCCTTAACCAAACCAAATTATGTGTCCATCAAAACGGAGACCTTGAGCAACAAGAAACTCTAGAGATTGAAACTGATGACTTTGATTACTCAAAACGATCCCAATGGCTACGTGCTGCCGTTTTAGGAGCCAATGATGGTTTAGTCTCCACAGCAGCTTTGATGATGGGTGTAGGAGCGGTGAAGCAAGACCTCAAGGTCATGATCCTCTCAGGATTTGCAGGGCTTGTGGCAGGTGCTTGCAGCATGGCCATAGGAGAGTTTGTGTCTGTGTACTCTCAATTGGACATAGAGGTTGCTCAATTAAAGAGAGACAAGAAAAGAGTCAGTAATGGCAGAGAGGAGGATCAAGAAGATGATAGTGAAGAAGAGAAAGAAACCTTGCCAAACCCTTTGCAAGCAGCAGCAGCTTCAGCTTTAGCCTTTTCAGTTGGTGCAATGGTTCCTCTTCTTGCAGCTTCTTTTATCAAGGACTATAAGGTAAGGCTAGGAGTGGTTTTTGTGGCGGTTAGTTTTGCTTTGGTGGCGTTCGGTTGTATGGGAGCATTCTTGGGTAAGGCGCCGGCATTGAGGTCTTGTGTGAGAGTCTTGGTTGGGGGTTGGTTAGCCATGGCCATAACTTTCGGGCTAACCAAGTTGATTGGGTCAAGTGGGCTCTAA 678 0.4617 MASDHSSLNQTKLCVHQNGDLEQQETLEIETDDFDYSKRSQWLRAAVLGANDGLVSTAALMMGVGAVKQDLKVMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQLKRDKKRVSNGREEDQEDDSEEEKETLPNPLQAAAASALAFSVGAMVPLLAASFIKDYKVRLGVVFVAVSFALVAFGCMGAFLGKAPALRSCVRVLVGGWLAMAITFGLTKLIGSSGL* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0711 225 Pfam VIT family 43 123 IPR008217 GO:0005384|GO:0030026
Lja5g0711 225 Pfam VIT family 128 217 IPR008217 GO:0005384|GO:0030026
Lja5g0711 225 MobiDBLite consensus disorder prediction 113 134 - -
Lja5g0711 225 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 14 222 - -
Lja5g0711 225 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 14 222 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0711 Lja-Chr5 6461251 6462388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0711 1 225 Nodulin-like Gene Family AT3G43660 63.717 6.47e-97 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0711 K22736 - gmx:100815165 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2737 2 41249546 41250500 Lja5g0711 5 6461251 6462388 PCT