Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0710 ATGGATCCATACTTCACCGGAGCTCCCCTAGAAACGGTGGAGGAGGAGGAGTCGAAGTTGGAGCTGAGGTCCCACCACCGGAGGGCCTTCTCCGACTTCCCATTCGATCTCGCCGGAAGCTTTGATGATGATGACATGCTATTTGATCCTTCGGATTTCATCAACACTGATTTCACATTTCCAACGCCGCCTCCTTCGCCGCGGCTGCCAGATATCGTTGAAGCCGTAGTTGGTTCGGATGAAACAGGGAGGCTGGACGGCTCCGGTACGAGTTCCGGGATGTTGGTGCCACTAGCTAGGAGCTTGACCGTCAAATCCAATGATCTGATTGGAGCAACTGACGGCGGGGAGGGTAGTGGTGGTAAAAAAAAGGCCAAGCGCCGTCACAGGCATAGCTTTTCCATTGATGGGTCCTCGACGTTAATGTCATTTCAGGGTGTGCCATCGCATTTGATAAAGAGGGCCATGCCCCCTGATCAACTTGCAGAACTTGAAAGGGTTGATCCCGTGAGAGCTAGGAGGATTGTTGCTAATAGGGAATCTGCTGCTAGATCGAAGGAGAGGAAAAATCGTTATGTAAGTGAGATGGAAAAGAAGCTGCAAGATCTTCAGATGCAATCAGCCAACCTCTCTCAACGTCTTCTCATCCTAAAGAAAGACACTGTAGATTTGACTACTTTGCAAGAGCAGCTCAAGACGAACTTACAGAACATGGGACAACAATCTCAAATTCAATTTGATCTGGACCAAACGATAAAGGAAGAATTGAATTTCCTTAGGAAGCAAACTCTCCAAAATGCTGCTGTCATTGCTAATCATTCTTCTGATGGAGTAGGTATGCATCAGGTTCCTAATCCCCCACCGCAGCTGCAGACCCCTCAGCAACCACCACAGCTTTTCCCGCTGCCGCCGCCACCTCCTCTTCCTCCATCTGGTCAAGATTTCAGTGGTCATTTTGGTTATAGAGGATATCTACAATCACAGGAACTAGCTGGCAATAGCAACGGAAAATGA 1014 0.4882 MDPYFTGAPLETVEEEESKLELRSHHRRAFSDFPFDLAGSFDDDDMLFDPSDFINTDFTFPTPPPSPRLPDIVEAVVGSDETGRLDGSGTSSGMLVPLARSLTVKSNDLIGATDGGEGSGGKKKAKRRHRHSFSIDGSSTLMSFQGVPSHLIKRAMPPDQLAELERVDPVRARRIVANRESAARSKERKNRYVSEMEKKLQDLQMQSANLSQRLLILKKDTVDLTTLQEQLKTNLQNMGQQSQIQFDLDQTIKEELNFLRKQTLQNAAVIANHSSDGVGMHQVPNPPPQLQTPQQPPQLFPLPPPPPLPPSGQDFSGHFGYRGYLQSQELAGNSNGK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0710 337 SMART brlzneu 165 230 IPR004827 GO:0003700|GO:0006355
Lja5g0710 337 Coils Coil 186 220 - -
Lja5g0710 337 CDD bZIP_plant_RF2 171 220 IPR044759 GO:0003700|GO:0006355
Lja5g0710 337 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 168 231 IPR004827 GO:0003700|GO:0006355
Lja5g0710 337 MobiDBLite consensus disorder prediction 276 337 - -
Lja5g0710 337 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 15 295 - -
Lja5g0710 337 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 15 295 - -
Lja5g0710 337 Gene3D - 171 223 - -
Lja5g0710 337 MobiDBLite consensus disorder prediction 286 312 - -
Lja5g0710 337 SUPERFAMILY Leucine zipper domain 171 222 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0710 Lja-Chr5 6451914 6454058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0710 105 260 bZIP Transcription Factor Family AT2G40620 45.513 1.84e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0710 K20557 - lja:Lj0g3v0093809.1 179.874