Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0693 ATGGCTGGATTTTGGATCATGTTTTGTGGCGAAACAAAGTCTTACAGTTATGATTATAAGTTTCTCCTTGATCCTTCTGCATGTATCAACCATTTGATGATAACTTGCTATGATGTCTTGCTGCTCATCATGCTCTTGTTTATAATGCTCCTGAAGCCATCATTGAAACCACTTCAGGGTCTAATAAGGGTGCAAAGGTATTCAAATTTGCAGCTAGCTTCTGCCGCGATCAACGGTGCTCTTGGGTTGGTGCATTTGATTTTAGGAATTTGGGTTTTAGAGGAGAAGTTGAGGAAAAGCCAAACTGCATTGCCTATTAATTTCTGGTTGTTAGAATTCTCTCAGGGATTAACATGGTTGCTAGTGGGTTTAACTATAAGTCTCAAGTCCAAACAACTTTCAAGAACATGGTTAAGGCTTTTTTCTATTCTAGTCTTCTTGGTTTCTGGTATTTTCTCTGCTTCATCTTTATTTTATGCAATCAGCAGCAGAGAATTGCCACTCAAAGTAGCATTAGATGTTCTATCTTTTCCAGGGGCAGTGCTATTGCTATTATGTGCATATAAGGGCACTAGTTATAGAGACACTGATGGAGAAATTGATGAAACCCTTTACACCCCTTTAAATGGCGAGTCCAATAAAAATGATTCTAGTAGCAATATAACCCTATTTGCCAAAGCTGGATTCTTAAGTTCGATGTCGTTTTGGTGGCTGAATCCATTGATGAAGAGGGGTAAAGAGAAAACACTTCAGGATGAGGATGTCCCGAAGTTGCGGGAAGAAGAAAGAGTAGAAACTTGTTATTCATTGTTTCTTGATCAACTGAACAAGCAGAAACAGAAAGATCCATCCTCACAAGGTAATTTTTATGCCAGTGCAACACTTTTGAGGACAATCTTTTTATGCCACCGGCGAGAAATAATGATATCAGGATTCTTTGCAATGGTCAAGGTAATTGCTCTGTCTTCTGGACCTCTGCTTCTGAATTCCTTTATATTGGTTGCTGAGGGTAATCAGAGTTTCAAGAATGAAGGTTTAGTTTTGGCCCTATCACTTTTTTTAACCAAAATTGTAGAATCCCTGTCTCAAAGGCAATGGTACTTCCGCTCTAGACTAATTGGTCTCAAAGTTAGGTCACTGCTAAGTGCAGCCATTTATAGAAAACAACTGAGATTGTCCAATTCTGCTAGATTGATGCATTCTGGTGGTGAGATAATGAATTATGTGACTGTAGATGCTTATAGAATTGGAGAATTTGCCTATTGGTTTCACCAGACATGGACAACTAGCTTCCAGCTATGTATCTCAATAGTAATACTTTACCGAGCTGTTGGACTTGCTACAGTTGCCTCCTTGGTGGTAATAGTTATCACAGTACTTTGCAATACTCCACTTGCAAAGTTGCAACACAAGTTTCAGAGCAAACTTATGGTTGCACAAGATGAGAGATTGAAGGTTATGTCTGAGGCCCTTGTGAATATGAAGGTCTTGAAGTTGTATGCTTGGGAGACCAACTTCAAAAATTCTATAGAACGATTGAGGTATATGGAGCTCAAATGGGTTTCTGCAGTGCAATTGAGGAGGGCATACAACACTTTTCTCTTTTGGTCCTCACCTGTTTTGGTCTCAGCTGCTTCCTTCGGAACATGTTACTTTCTTAACATTCCTTTGCATGCAAACAATGTATTCACTTACGTGGCGACGCTACGCCTTGTCCAAGATCCAATTAGAACCATCCCTGATGTTATTGGGGTGGTTATTCAGGCAAAAGTTGCATTCGCTCGGATTGTAAAATTCCTGGAGGCACCTGAACTTCAGAGTGCTGATATTAGGAAGAGGTGTTCCAATAGCAATATCAGAGGTTCAATTTCAGTCAAGTCTGCTGACTTTTCTTGGGAAGATAATGTATCAAAGCCAACACTGAGAAACATAAATTTGGAAGTTAGACCTGGACAAAAGGTAGCTATTTGTGGAGAGGTTGGCTCAGGAAAATCAAGTCTCTTAGCAGCAATTCTCAGAGAAGTACCAATAATTCAGGGAACAATTGACGTTTATGGGAAATTTGCCTATGTTTCTCAAACAGCATGGATACAGACAGGTTCAATCAGGGATAACATATTGTTTGGATCAGCTATGGATGCTCAAAAGTATCAAGAAACACTTCATAGGACTTCACTGCTGAAGGATCTTGAGTTGTTTCCCCATGGTGATCTCACTGAAATAGGCGAGAGAGGGGTTAACCTGAGTGGAGGTCAGAAGCAGCGAATTCAACTGGCACGTGCTCTATATAAGAATGCTGATATATATCTCTTGGATGATCCATTTAGTGCTGTTGATGCACAAACTGCCACAAATTTGTTTACTGAATACATTGTAGAAGGACTTGCTGGGAAGACAGTCTTGCTTGTGACTCATCAAGTTGACTTCCTTCCAGCATTTGATTCTGTTTTGTTGATGTCAGATGGGGAAATCATACAAGCTGCTCCTTATCAACATTTGTTGACCTCAAGCAAAGAATTTCAGGAACTTGTGAATGCTCACAAAGAGACTGCGGGTTCTGACCGGCTTGTGGATGTTACTTCTTCCCAGAGACATTCAAGTTGTGGTAGAGAGATTAGAGAAACTTATGTGGATAAGGAGAAGCATGTTGAAGCATCAAAAGGAGATCAATTGATTAAGCAAGAAGAGAAAGAGACAGGAGACCAAGGGTTCAAGCCTTACTTACAGTATCTTAATCAGAACAAAGGATATATATACTTCTCCGTAGCTTCCCTTTCTCACCTTATATTTGTGATTGGCCAGATATTGCAAAATTCATGGATGGCTGCTAATGTTGACAATCCTCAAGTCAGCACTTTGAAATTGATTCTGGTTTACTTGTTGATTGGAGTTACTTCAACATTATTCTTATTGATGAGAAGTCTCTTCACCGTTGCTATGGGCCTTCAATCATCAAAATCTTTATTTTTACAGCTACTGAACTCTCTTTTTCGTGCACCAATGTCATTTTATGACTCCACACCTTTGGGACGGATTCTTACGAGGGTCTCTTCTGATCTCAGCATTGTTGATCTAGACATTCCATTTGGCCTTCTTTTTACTGTGGGAGCTACTACAAATTGTTTTTCTAGTCTGTCAGTTTTAGCAGTTGTTACTTGGCAAGTCTTGTTTGTCTCCATACCAATGATTTGTTTTGCAATTCGCTTGCAGAAATATTATTTCGCTTCTGCAAAAGAACTGATGCGGATGAATGGCACAACTAAATCCTTTGTAGCTAACCATATTGCTGAATCTGTTGCTGGAGCTATGACAATAAGGGCTTTTGAGGAGGAAGATCGCTTTTTTGTGAAGAACCTTGACCTAATTGATGTAAATTCTACTCCTTTCTTCCATAGTTTTGCAGCAAATGAGTGGTTGATCCAACGGTTGGAAACAGTAAGTGCAGTTGTTCTTGCATCTGCGGCACTTGGCATGGTTATACTTCCACCTGGGACTTTCAACTCTGGATTTATTGGCATGGCTCTCTCTTATGGCCTTTCACTTAACATTACGCTAGTAGCTTCAATTCAAAATCAATGCAACATTGCGAATTATATAATATCCGTTGAGAGGCTAAATCAATATATGCATATACCAAGTGAAGCTCCAGAAGTAATAGAAGGAAAAAGCCCTCCTGTTAATTGGCCAATTGCTGGTAGAGTTGAAATAAATGAACTGCAGCTACGATATAGGCCTGATGCACCCCTAGTGCTCCGTGGGATCACATGCACATTTGAAGGAGGGCACAGAATTGGTATCGTTGGCCGGACAGGCAGTGGCAAGTCCACCCTAATTGGTGCTTTATTCCGTCTTGTTGAGCCAGCAGGTGGAAAAATCACAGTTGATGGCATTGACATTTGTTTAATTGGACTTCATGATCTGAGGTCGCGTTTTGGTATTATACCTCAGGACCCTACTCTTTTTAATGGGACTGTCAGATACAATTTGGACCCGTTATCTCAACACTCTGATCAATTTATATGGGAGGTTCTGGGGAAGTGTCAATTGCATGAAGCTGTCAAAGAGAAAGGGGGCTTAGACTCCTCAGTTGTTGAAGATGGGGCAAACTGGAGCATGGGACAAAGGCAGTTATTCTGTTTAGGGCGCGCTCTCCTAAGGAGAAGTCGGATATTGGTGCTCGATGAAGCGACTGCTTCAATCGATAATGCAACTGATTTGATTCTGCAGAAAACCATTAGGACTGAGTTTGCAGATTGTACAGTAATTACAGTTGCTCACAGGATTCCAACTGTGATGGATTGCACAAAGGTTCTTGCCATAAGTGATGGAAAACTGGCAGATTATGATGAGCCAATGAACTTGATGAAGAGAGAAGGATCACTGTTTGGGAAGCTTGTCAAAGAATATTGGTCTCATTTTCAGTCTGCAGAATCTCTTTGA 4440 0.4045 MAGFWIMFCGETKSYSYDYKFLLDPSACINHLMITCYDVLLLIMLLFIMLLKPSLKPLQGLIRVQRYSNLQLASAAINGALGLVHLILGIWVLEEKLRKSQTALPINFWLLEFSQGLTWLLVGLTISLKSKQLSRTWLRLFSILVFLVSGIFSASSLFYAISSRELPLKVALDVLSFPGAVLLLLCAYKGTSYRDTDGEIDETLYTPLNGESNKNDSSSNITLFAKAGFLSSMSFWWLNPLMKRGKEKTLQDEDVPKLREEERVETCYSLFLDQLNKQKQKDPSSQGNFYASATLLRTIFLCHRREIMISGFFAMVKVIALSSGPLLLNSFILVAEGNQSFKNEGLVLALSLFLTKIVESLSQRQWYFRSRLIGLKVRSLLSAAIYRKQLRLSNSARLMHSGGEIMNYVTVDAYRIGEFAYWFHQTWTTSFQLCISIVILYRAVGLATVASLVVIVITVLCNTPLAKLQHKFQSKLMVAQDERLKVMSEALVNMKVLKLYAWETNFKNSIERLRYMELKWVSAVQLRRAYNTFLFWSSPVLVSAASFGTCYFLNIPLHANNVFTYVATLRLVQDPIRTIPDVIGVVIQAKVAFARIVKFLEAPELQSADIRKRCSNSNIRGSISVKSADFSWEDNVSKPTLRNINLEVRPGQKVAICGEVGSGKSSLLAAILREVPIIQGTIDVYGKFAYVSQTAWIQTGSIRDNILFGSAMDAQKYQETLHRTSLLKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYKNADIYLLDDPFSAVDAQTATNLFTEYIVEGLAGKTVLLVTHQVDFLPAFDSVLLMSDGEIIQAAPYQHLLTSSKEFQELVNAHKETAGSDRLVDVTSSQRHSSCGREIRETYVDKEKHVEASKGDQLIKQEEKETGDQGFKPYLQYLNQNKGYIYFSVASLSHLIFVIGQILQNSWMAANVDNPQVSTLKLILVYLLIGVTSTLFLLMRSLFTVAMGLQSSKSLFLQLLNSLFRAPMSFYDSTPLGRILTRVSSDLSIVDLDIPFGLLFTVGATTNCFSSLSVLAVVTWQVLFVSIPMICFAIRLQKYYFASAKELMRMNGTTKSFVANHIAESVAGAMTIRAFEEEDRFFVKNLDLIDVNSTPFFHSFAANEWLIQRLETVSAVVLASAALGMVILPPGTFNSGFIGMALSYGLSLNITLVASIQNQCNIANYIISVERLNQYMHIPSEAPEVIEGKSPPVNWPIAGRVEINELQLRYRPDAPLVLRGITCTFEGGHRIGIVGRTGSGKSTLIGALFRLVEPAGGKITVDGIDICLIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDQFIWEVLGKCQLHEAVKEKGGLDSSVVEDGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLAISDGKLADYDEPMNLMKREGSLFGKLVKEYWSHFQSAESL* 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0693 1479 Pfam ABC transporter transmembrane region 919 1174 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja5g0693 1479 Pfam ABC transporter transmembrane region 308 573 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja5g0693 1479 CDD ABC_6TM_ABCC_D1 309 596 IPR044746 GO:0140359
Lja5g0693 1479 Gene3D - 1218 1468 IPR027417 -
Lja5g0693 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 625 846 IPR003439 GO:0005524
Lja5g0693 1479 CDD ABCC_MRP_domain1 623 823 - -
Lja5g0693 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1224 1460 IPR027417 -
Lja5g0693 1479 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 67 1478 - -
Lja5g0693 1479 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 67 1478 - -
Lja5g0693 1479 CDD ABCC_MRP_domain2 1232 1451 - -
Lja5g0693 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 928 1197 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja5g0693 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 846 IPR027417 -
Lja5g0693 1479 Pfam ABC transporter 641 775 IPR003439 GO:0005524
Lja5g0693 1479 CDD ABC_6TM_ABCC_D2 916 1209 IPR044726 GO:0140359
Lja5g0693 1479 SMART AAA_5 1260 1443 IPR003593 -
Lja5g0693 1479 SMART AAA_5 650 823 IPR003593 -
Lja5g0693 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 588 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja5g0693 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1234 1467 IPR003439 GO:0005524
Lja5g0693 1479 Gene3D ABC transporter type 1, transmembrane domain 273 605 IPR036640 GO:0005524|GO:0016021
Lja5g0693 1479 Gene3D ABC transporter type 1, transmembrane domain 882 1215 IPR036640 GO:0005524|GO:0016021
Lja5g0693 1479 SUPERFAMILY ABC transporter transmembrane region 296 601 IPR036640 GO:0005524|GO:0016021
Lja5g0693 1479 ProSitePatterns ABC transporters family signature. 748 762 IPR017871 GO:0005524
Lja5g0693 1479 SUPERFAMILY ABC transporter transmembrane region 919 1214 IPR036640 GO:0005524|GO:0016021
Lja5g0693 1479 Gene3D - 618 852 IPR027417 -
Lja5g0693 1479 Pfam ABC transporter 1251 1398 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0693 Lja-Chr5 6233585 6248400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0693 1230 1478 Calmodulin-binding Proteins AT2G36910 29.688 4.57e-27 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0693 K05666 - gmx:100811468 2435.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2711 2 39438276 39448933 Lja5g0693 5 6233585 6248400 ECH
Lja5g0693 5 6233585 6248400 Lja5g0693 5 6233585 6248400 ECH
Lja2g2711 2 39438276 39448933 Lja5g0693 5 6233585 6248400 PCT