Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0684 ATGGCAAGTGCTGCTTCTTCCTTTCATTGTTACTTGGTAGTTCTCACTCTGGTTCTCCTTGGTTGTTTCAGTAGCTGCATTTCAAGTCAGATTGATTTGGGGTCGAGATTATTGGCTAGCAAGGACCAAAAATGGCTTTCTGAAAATGGCACATTTGCTTTGGGGTTCACTCCAGCTGCAAACACTGATAATAACAGATTATTTACTTTGGCCATTTGGTTTGCAAGGCTTCCAGGAGATCCAACTTTAGTTTGGTCACCTAATAGAGACTCTCCTGTATCTCAAGATGCAATCTTGGAGCTTGACACCACTGGCAACCTCGTCCTCACGGACGGAGACACCACCATATGGGCCTCAAACACCTCAAATTCTGATGTAGCAGCAGCTGTCATGACAGAATCCGGCAACTTCATCCTCCACACCACCAACAACCACCCTGCGTGGCAGAGTTTTTCTCAACCTTCTGATACACTCCTCCCCAACCAACCTCTCACAGTCTCTTCTGAACTAACATCATCAAAGTCTTCATCTCATGGTGGTAGCTACTATGCTCTCAAAATGCTTCAACAGCCAACTTCCTTAAACCTTGCCCTCACTTACAATCTGCCAGAAACCTACCAGGCTTTGGATGAACACGAACCATTCACCAACTATTCCTACTGGCATGGCCCTGATATCTCCAACGTGACTGGAGAAGTTATAGCAGTTTTAGACCAAGCTGGGAGCTTTGGAATTGTGTATGGAGATTCATCTGATGGAGCAGTTTATGTGTACAAGAATGATGATGATGATGCAGGCTTGTCTTCTGCAATTCATAAATCTAATTCTACACCATTAACTGTTCTTAGGAGACTCACACTGGAGAAGAATGGCAATTTGCGGCTATACCGTTGGGACGATGTGAATGGTTCAAGTCAGTGGGTCTCACAATGGGCTGCAGTTTCAAATCCATGTGACATTGCTGGAATTTGTGGCAATGGGGTTTGTGAATTGGACAGAAGCAAGATAAAAGCCTCTTGCACTTGCTTGCCAGGAACTTCTAAAGTTGGCAGAGATGGCCAGTGCTATGAGAATTCATCTCTTGTTGGAAAATGCAATGGCCAACATGAAAACCAGACATCACTTAGGATGTCAATGGTGCAGCAAACTAACTACTATTTTTCTGAATTTTCTGTAATAGCTAACTATAGTGATGTTGATGTTGCTTCAGTGTCAAAATGTGGGGATGCTTGCTTATCAGATTGTGATTGTGTTGCTTCAGTTTATGGACTAAATGAGGAGAGACCTTACTGTTGGGTATTAAGGAGCTTAAGTTTTGGGGGTTTTGAGGATACTAGCTCTACTTTGTTTGTGAAGGTCAGAGCAAATGGTTCATGGATAGCAGGAGGGTCTAAATCTAATAGTAGCTCTTCTGATGGATTGGGGAGTGCTAAGGAAAAGGCTTTGATTATTCCCATTGTTCTGACCATGATAATCCTCATTGCTTTGCTGTGTTTATTACTGTATTACAGTGTTCACAGAAAAAGAACTATGAGAAGAGAGATGGAAAGTTCCTTAATCTTATCAGGTGCTCCTATGAATTTCACCTACCGCGATTTGCAAATCAGGACAAGCAACTTTTCACAGCTGCTAGGAACAGGTGGGTTTGGAACTGTGTATAAAGGAAGCCTAGGAGATGGTACCCTAGTGGCAGTGAAGAAACTTGACAGGGTTTTGCCCCATGGAGAGAAAGAATTTATCACTGAAGTAAACACCATTGGTTCAATGCATCATATGAATTTGGTTCGCCTATGTGGCTATTGTTCAGAGGGATCACAAAGGCTTCTGGTATATGAGTTCATGAAGAATGGTTCCTTGGATAAATGGATCTTTCCTTCATATCAAGGCAGAGATAGATTGCTAGATTGGACAACTCGTTTTGAGATAGCTATAGCCACCGCACAAGGGATAGCATACTTTCATGAGCAGTGCAGGGATAGGATAATACACTGTGACATCAAACCAGAAAATATATTGTTAGATGAAAATTTTTGTCCTAAAGTTTCTGATTTTGGACTGGCCAAATTGATGAGAAGAGAGCACTCTCATGTGGTAACCATGATTAGAGGCACTAGAGGCTATTTGGCACCAGAATGGGTTAGTAATCGCCCTATAACTGTAAAAGCTGATGTTTACAGCTATGGGATGCTTCTTTTAGAAATCATTGGTGGCAGGAGAAATCTTGACATGTCCTTTGATGCAGAAGACTTCTTCTATCCTGGCTGGGCTTACAAGGAGATGACGAATGGATCAGTAATCAAAGTGGCAGATAGAAGATTAAATGGTGCAGTTGATGAAGAAGAGCTAATGAGAGCTCTCAAAGCTGCCTTTTGGTGCATCCAAGATGAGATTTCGACGCGACCACCAATGGGGGAAGTGGTACGGATGCTGGAAGGTTCAATCAACATTAACACGCCACCGATGCCGCAAACAGTGCTGGAGTTAATTGAGGAAGGTCTAGAGCATGTATACAAAGCTATGAAAAGAGAGTATAATCAGTTCAGCTCATTCACCATTACCAGCCATCTTACATCTCATGCCACATGTAGCAATTCATCAATGTCACCAAGATAG 2613 0.4252 MASAASSFHCYLVVLTLVLLGCFSSCISSQIDLGSRLLASKDQKWLSENGTFALGFTPAANTDNNRLFTLAIWFARLPGDPTLVWSPNRDSPVSQDAILELDTTGNLVLTDGDTTIWASNTSNSDVAAAVMTESGNFILHTTNNHPAWQSFSQPSDTLLPNQPLTVSSELTSSKSSSHGGSYYALKMLQQPTSLNLALTYNLPETYQALDEHEPFTNYSYWHGPDISNVTGEVIAVLDQAGSFGIVYGDSSDGAVYVYKNDDDDAGLSSAIHKSNSTPLTVLRRLTLEKNGNLRLYRWDDVNGSSQWVSQWAAVSNPCDIAGICGNGVCELDRSKIKASCTCLPGTSKVGRDGQCYENSSLVGKCNGQHENQTSLRMSMVQQTNYYFSEFSVIANYSDVDVASVSKCGDACLSDCDCVASVYGLNEERPYCWVLRSLSFGGFEDTSSTLFVKVRANGSWIAGGSKSNSSSSDGLGSAKEKALIIPIVLTMIILIALLCLLLYYSVHRKRTMRREMESSLILSGAPMNFTYRDLQIRTSNFSQLLGTGGFGTVYKGSLGDGTLVAVKKLDRVLPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSQRLLVYEFMKNGSLDKWIFPSYQGRDRLLDWTTRFEIAIATAQGIAYFHEQCRDRIIHCDIKPENILLDENFCPKVSDFGLAKLMRREHSHVVTMIRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSFDAEDFFYPGWAYKEMTNGSVIKVADRRLNGAVDEEELMRALKAAFWCIQDEISTRPPMGEVVRMLEGSININTPPMPQTVLELIEEGLEHVYKAMKREYNQFSSFTITSHLTSHATCSNSSMSPR* 871
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0684 870 Gene3D Phosphorylase Kinase; domain 1 502 613 - -
Lja5g0684 870 PANTHER OS07G0415500 PROTEIN 10 870 - -
Lja5g0684 870 SMART serkin_6 538 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0684 870 SUPERFAMILY Protein kinase-like (PK-like) 516 811 IPR011009 -
Lja5g0684 870 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Lja5g0684 870 Gene3D - 25 153 IPR036426 -
Lja5g0684 870 ProSiteProfiles Protein kinase domain profile. 538 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0684 870 CDD B_lectin 46 154 IPR001480 -
Lja5g0684 870 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 10 870 - -
Lja5g0684 870 Gene3D Transferase(Phosphotransferase) domain 1 614 827 - -
Lja5g0684 870 CDD STKc_IRAK 544 812 - -
Lja5g0684 870 PIRSF SRK 2 862 IPR024171 GO:0004674
Lja5g0684 870 Pfam S-locus glycoprotein domain 279 346 IPR000858 GO:0048544
Lja5g0684 870 Pfam D-mannose binding lectin 82 169 IPR001480 -
Lja5g0684 870 ProSitePatterns Protein kinases ATP-binding region signature. 544 567 IPR017441 GO:0005524
Lja5g0684 870 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 168 IPR036426 -
Lja5g0684 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Lja5g0684 870 SMART blect_4 36 154 IPR001480 -
Lja5g0684 870 Pfam Protein kinase domain 541 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja5g0684 Lja-Chr5 6137603 6142643 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0684 492 820 Receptor kinase-like Gene Family AT5G20050 43.258 6.98e-83 271
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lja5g0684 Pkinase 1.8e-45 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0684 - - gmx:100775424 1461.05