Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0677 ATGACAACGATACGCAGGTTCTGCTGCAACGATCTTCTTCGTTTTGCCAATGTCAATCTTGACCACCTCACTGAAACTTTTAACATGTCCTTCTACATGACCTATCTAGCGCGATGGCCCGATTATTTCCACGTTGCCGAAGGCCCTGGAAACCATATCATGGGTTACATTATGGGTAAAGTAGAAGGGCAAGGTGAATCTTGGCATGGCCATGTAACTGCAGTAACTGTTGCTCCAGAGTATCGCAGGCAGCAGTTAGCCAAGAAACTGATGAATTTGCTGGAAGACATCAGTGACAAAATTGACAAAGCTTACTTTGTTGATCTCTTTGTGAGAGCATCAAATACACCTGCCATCAAGATGTATGAAAAGCTTGGCTATGTGATCTATCGACGAGTGCTACGCTACTATTCTGGGGAAGAAGATGGATTAGATATGAGGAAGGCATTATCTCGTGATGTTAAAAAGAAGTCTGTCATCCCTCTTAAACGGCCAATAACTCCTGATGAATTAGAGTATGACTAA 525 0.4286 MTTIRRFCCNDLLRFANVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNHIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVKKKSVIPLKRPITPDELEYD* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0677 174 Gene3D - 2 163 - -
Lja5g0677 174 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016407
Lja5g0677 174 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016407
Lja5g0677 174 CDD NAT_SF 45 97 - -
Lja5g0677 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 173 - -
Lja5g0677 174 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Lja5g0677 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 173 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja5g0677 Acetyltransf_1 1.5e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0677 K17972 - vvi:100252851 351.673