Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja5g0674 | ATGGCTGAGGACTGGGATCTCTTTGCCATCGTGAGAAGCTGCCAATCAGCCACCAATACTGCCACGGCCCCAATAGGAAATCCACCACCTCCTACCACCAACACCACACCACCTTCCTTGGCCACTTTTACTTTCAAGGAAGAATATAATGAGGCATTCTCTTTTCCCAATATAGTGCAACCTATAACCAATGAGTTTCATGACCTAAACCAATTGCTCACACCCTTTAACCCCACCACCAACACCACTAGTAGTGCTAATGGTATCAATACTAATTCCCCTGATTTTGCAGGATGCATTGGACAACACCAAAGCAACCACCACCATCTTTCTGTGCTTGCCCCTCCTTCTAAAACCTCCATTTGGCCCTCCACTTCAAGTTTCAACAGAAGACAACATGTACAGAAAAACCAGAATCAGCTACCAATAGTTCAGAAACAGGATTTTCAAGTACCCCAGAGCAATTCTGCTTTGATTTCATCAAACCCACAACCTCAAACACCCAAAGCAAGAAAAAGAAAAAACCAACAGAAGAAAATGGTGTGCCATGTCACAGCAGATAACCTCTCATTAGATTTGTGGGCATGGCGTAAATATGGACAAAAACCCATCAAGGGTTCTCCATATCCAAGGAACTATTACAGGTGTAGCAGCTCCAAAGGTTGTGCCGCACGAAAGCAAGTTGAACGGAGCAACACTGAAGATGATATCTTCATCGTTACATACACCGGAGACCACTCGCATCCTAGACCAACTCACCGAAACTCGCTCGCCGGGAGTACCCGGAACAAGTCTATGCCATCTTTGCAAACCAAAACTACTAGTACTACTACTTCTTGTTCTTCTCCTCTGTCCTCATCTACTCCGGTGTACCCTCCGGCAGAAGATCCGCCGGCAACGGATGACCCGGATCCAGACCCTGAAATTGAAACTGACAATGACGTCGAAGATGAAGCTGACATTCTGCTACCCATTGATGTAGCCATGCCCGATGATATGTTTATGGACTTTGATCACTTTCCCAGTGGCAGAGGCAGTGGTTAA | 1044 | 0.4598 | MAEDWDLFAIVRSCQSATNTATAPIGNPPPPTTNTTPPSLATFTFKEEYNEAFSFPNIVQPITNEFHDLNQLLTPFNPTTNTTSSANGINTNSPDFAGCIGQHQSNHHHLSVLAPPSKTSIWPSTSSFNRRQHVQKNQNQLPIVQKQDFQVPQSNSALISSNPQPQTPKARKRKNQQKKMVCHVTADNLSLDLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCAARKQVERSNTEDDIFIVTYTGDHSHPRPTHRNSLAGSTRNKSMPSLQTKTTSTTTSCSSPLSSSTPVYPPAEDPPATDDPDPDPEIETDNDVEDEADILLPIDVAMPDDMFMDFDHFPSGRGSG* | 348 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja5g0674 | 347 | Gene3D | WRKY domain | 173 | 244 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lja5g0674 | 347 | PANTHER | WRKY TRANSCRIPTION FACTOR 27-RELATED | 3 | 340 | - | - | |
Lja5g0674 | 347 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 3 | 340 | IPR044810 | GO:0003700 | |
Lja5g0674 | 347 | SUPERFAMILY | WRKY DNA-binding domain | 187 | 251 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lja5g0674 | 347 | MobiDBLite | consensus disorder prediction | 299 | 319 | - | - | |
Lja5g0674 | 347 | MobiDBLite | consensus disorder prediction | 156 | 170 | - | - | |
Lja5g0674 | 347 | MobiDBLite | consensus disorder prediction | 253 | 289 | - | - | |
Lja5g0674 | 347 | Pfam | WRKY DNA -binding domain | 192 | 249 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja5g0674 | 347 | SMART | WRKY_cls | 190 | 250 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja5g0674 | 347 | ProSiteProfiles | WRKY domain profile. | 185 | 251 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja5g0674 | 347 | MobiDBLite | consensus disorder prediction | 156 | 179 | - | - | |
Lja5g0674 | 347 | MobiDBLite | consensus disorder prediction | 241 | 319 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja5g0674 | Lja-Chr5 | 6073274 | 6074802 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja5g0674 | 1 | 343 | WRKY Transcription Factor Family | AT4G01250 | 36.232 | 1.76e-60 | 194 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lja5g0674 | WRKY | 8.6e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja5g0674 | K13425 | - | aprc:113871802 | 348.591 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lja3g1845 | 3 | 20906793 | 20908656 | Lja5g0674 | 5 | 6073274 | 6074802 | ECH | |
Lja1g3051 | 1 | 36914094 | 36915753 | Lja5g0674 | 5 | 6073274 | 6074802 | ECH | |
Lja4g0384 | 4 | 3088280 | 3090114 | Lja5g0674 | 5 | 6073274 | 6074802 | ECH | |
Lja5g0674 | 5 | 6073274 | 6074802 | Lja5g0674 | 5 | 6073274 | 6074802 | ECH |