Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0664 ATGGATTTTCCTCACCCTGATACTCACACTCTTCAAGAATCCAAAAGCTCTTCTCACATGGAGTCTCAAAAGCTTACACCATTGATTTTAATGCTTCTCCTTTTCATGCCTTTCTCTGCTTCATTCACTCCCTCTGACAACTTCCTTCTTAACTGTGGATCACACACCAATGCTTCCTTCTTCAACAGAGTCTTCATCAGTGATTCCACCAACCCAGGTTCCAGTTTTCTCTCTGCAGATGATTCCATATCTCTCACTAACCAAAACTCACCTCCAAATTTGCCAGTTTTGTACCACACAGCCAGAGTGTTCACAAGCACTGAGAAATACAGATTCAGCATGAAGAGAAACGGTACTCACTTGGTGCGTTTCCACTTTTTCCCTTTTAAAGCTTCAAGTTTTGATCTGAAATCTGCTAAATTTAGTGTCTTGGTTAATGGGGTTTCTGTTCTGAGTGAATTCCGGCCACCAAATGATGTGTTGCTTAAAGAGTTTATTTTGAAGATAGAATCAAACCTGCTTGAAATTTTGTTTAGACCTGTTGGTAATTCAGGTTTTGGTTTTGTCAATGCTTTGGAGGTGTTTACTGCTCCTGTAGATTTCATCATAGATTATGGAACAAGGTTTATTGGTCCTTCTGGAGTGGAGGAGTATAGAAACCTTTCATCTCAGGTTTTAGAAACTGTTCATAGGATTAATGTTGGAGGCTTGAAAATAACTCCTTTTAATGATACCCTTTGGAGGACTTGGATTCCTGATGAGGATTATCTGGTTGTTAAGGATGCAGCTAAGGCTGCAGTAAGCACTCACATACCGAATTTTCAGAAGGGAGGCGCGACTCGAGAGATCGCGCCTGAATATGTTTACATGACTGCTCAGCAGATGAACAAGGAGAACACAATCTTAGCTTCAAGATTCAACTTAACATGGAACTTTCCTGTGACTCCTGGCGGTGTTCCATATTTGATAAGGTTGCATTTCTGTGATATTGTTAGTCCTTCTCTGAACTTGCTCTACTTTGATGTGTATATCAATAGGTACAGTGCATATAAGGATCTTGATTTGTCAACCCTTACGATTCATGAGCTTGCATCACCGGTCTATGTGGATTTCGTTACAAATTCAGATGATTCGGGTGTTATTGAAGTAAGTGTTGGTCCTTCTGACCTGAGCAGTACTATAAGGATGAATGCCATATTGAATGGTGCAGAGGTAATGAAGATGGTCAATGATGTGGATAGTACTAAAGTTGTGCACAAAAGGAAAAAGTTGAGGGTGGTGTTGGGTTCAATTATTGGAGGAATTTTGGTCTTATTTTTTGTTGTATCTGCTTTATTACTTGCTTACAAATGCAAGAAGAAGAAACCGAAACAAAGGTCAGTGGAAAGTGTTGGATGGACACCTCTGCGAATGTTTGGAGGGAGTTCACTTAGTAGAACATCTGAACATGGTTCTCATGGACATTTTGGCTTGAAGTTCTCTTTTGCAGAAATACAATCAGCAACAAACAATTTTGATAAGAGTTTGATTATAGGGTCGGGTGGGTTCGGTATGGTCTACAAGGGAGTGCTCAAAGACAATGTAAAGGTTGCTGTCAAGAGAGGCATGCCTGGTTCCAGACAAGGCCTTCCAGAATTCCACTCGGAAATAACAATTTTATCCAAAATTCGCCATCGCCACCTTGTTTCACTAGTCGGTTTTTGTGAAGAAAATTCAGAAATGATACTTGTCTATGAGTATGTTGAAAAAGGTCCACTGAAAAAGCATCTATATGGCTCAGCAAAACTGCCACCTCTTTCTTGGAAGCAGCGTCTAGAGATATGCATTGGTGCCGCTAGAGGTCTCCACTATCTTCACACTGGTTTTGCTCAGGGAATCATCCACCGTGACATTAAATCAACCAACATATTGCTCGATGAAGATTATGTTGCCAAGGTTGCTGACTTCGGTCTTTCAAGATCTGGGCCGTGCATTAATGAAACACATGTGAGTACCGGTGTGAAAGGCAGTTTCGGTTATCTTGATCCCGAGTATTACCGGAGGCAGCAGCTTACGGATAAATCGGATGTTTATTCGTTTGGGGTTGTGCTTTTTGAGGTACTATGTGGCAGACCTGCTGTTGATCCGCAACTCACCAGGGAACAGGTGAATTTAGCAGAATGGGCGCTTGAATGGCTGAAGAAGGGCATGCTGGAGCATATTGTCGATCCGCTTCTTGTTGGACAGGTCAAGCTAAGCTCGTTAAAGAAATTTGGCGAGACAGCAGAGAAATGTTTGGCTGAATATAGTGTTGACCGGCCAACTATGGGTGATGTCTTGTGGAATTTGGAACATGCACTTCAGCTCCAAGAGAGTGGACAACGAAGGGAGCGACATGCTCATAGCAGCGACAATGAAGCAGTGGATGAGACAACTACAAGTTTTTCTGAGAATCCTTCTACCAACAGCAGAACAGGAAGAGATTATGATAATGGTTGTCCAGACATAAGTAGTAGTGAAGTGTTTTCCCAGCTAATGACCAATGATGGCAGATAG 2535 0.4181 MDFPHPDTHTLQESKSSSHMESQKLTPLILMLLLFMPFSASFTPSDNFLLNCGSHTNASFFNRVFISDSTNPGSSFLSADDSISLTNQNSPPNLPVLYHTARVFTSTEKYRFSMKRNGTHLVRFHFFPFKASSFDLKSAKFSVLVNGVSVLSEFRPPNDVLLKEFILKIESNLLEILFRPVGNSGFGFVNALEVFTAPVDFIIDYGTRFIGPSGVEEYRNLSSQVLETVHRINVGGLKITPFNDTLWRTWIPDEDYLVVKDAAKAAVSTHIPNFQKGGATREIAPEYVYMTAQQMNKENTILASRFNLTWNFPVTPGGVPYLIRLHFCDIVSPSLNLLYFDVYINRYSAYKDLDLSTLTIHELASPVYVDFVTNSDDSGVIEVSVGPSDLSSTIRMNAILNGAEVMKMVNDVDSTKVVHKRKKLRVVLGSIIGGILVLFFVVSALLLAYKCKKKKPKQRSVESVGWTPLRMFGGSSLSRTSEHGSHGHFGLKFSFAEIQSATNNFDKSLIIGSGGFGMVYKGVLKDNVKVAVKRGMPGSRQGLPEFHSEITILSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSAKLPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDEDYVAKVADFGLSRSGPCINETHVSTGVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLTREQVNLAEWALEWLKKGMLEHIVDPLLVGQVKLSSLKKFGETAEKCLAEYSVDRPTMGDVLWNLEHALQLQESGQRRERHAHSSDNEAVDETTTSFSENPSTNSRTGRDYDNGCPDISSSEVFSQLMTNDGR* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0664 844 Gene3D Phosphorylase Kinase; domain 1 475 580 - -
Lja5g0664 844 MobiDBLite consensus disorder prediction 784 799 - -
Lja5g0664 844 ProSiteProfiles Protein kinase domain profile. 505 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0664 844 Gene3D - 225 411 - -
Lja5g0664 844 Gene3D - 47 200 - -
Lja5g0664 844 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Lja5g0664 844 MobiDBLite consensus disorder prediction 784 831 - -
Lja5g0664 844 Gene3D Transferase(Phosphotransferase) domain 1 581 805 - -
Lja5g0664 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Lja5g0664 844 SMART serkin_6 505 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0664 844 MobiDBLite consensus disorder prediction 800 821 - -
Lja5g0664 844 CDD STKc_IRAK 511 777 - -
Lja5g0664 844 SUPERFAMILY Protein kinase-like (PK-like) 490 774 IPR011009 -
Lja5g0664 844 Pfam Malectin-like domain 50 408 IPR024788 -
Lja5g0664 844 PANTHER OS07G0166700 PROTEIN 35 788 IPR045272 GO:0004714|GO:0006468
Lja5g0664 844 Pfam Protein tyrosine and serine/threonine kinase 510 705 IPR001245 GO:0004672|GO:0006468
Lja5g0664 844 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 35 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0664 Lja-Chr5 5994187 5997408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0664 28 844 Receptor kinase-like Gene Family AT3G46290 47.971 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja5g0664 Malectin_like 5.7e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0664 - - lja:Lj2g3v1902230.1 1418.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0664 5 5994187 5997408 Lja5g0664 5 5994187 5997408 ECH
Lja2g2655 2 37147233 37150416 Lja5g0664 5 5994187 5997408 PCT