Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0651 ATGCCTTCATGGGGGGTAAAATCATCATCAAAAGAAACCAAGAAGAAAGCAAGTAAGGAAAGTTTTATTGACACATTGCAGCGAAAATTTAGAAGTCTATCTGAAGGTAAACTAAGTATTATATATGGAGGATCTCGTAGACATTGCAATGACACAATTTCTGAGAAGGGGGATCGTTCTCCGACTGAGTCAAGATCTACTTCACCTTCCAGAGTGGGAAGGTGTCAAAGTTTTGCTGCAAGGCCTCTTTCTCAGCCACTTCCACTTCCTGGTCTCCACCCTTCAAATGTAGGCCGAGTAGATTCCGAAATTAGCATATCATCAAAGTCAAGACCGGAAAAGGGCTCCAAGCCATCATTGTTTCTTCCGCTTCCAGCACCTGGATGCATACGTTGGAAACCTAACCCTGGAGATTTGGAGGGAGATATGGTCAATGCTTCAGTCTTTAGCGATTGCTCCGCTGATAGTGATGAGCCAGTAGAGTCACGCAATCGTAGTCCTCTCGCACCTGACTCTGATACTGGAACTAAAACTGCTGCTGGCAGTCCTTCCGGCTTGATGCTCAAGGATCAATCGTCTGCTGTTTCCCAACTGAATTCAAGAGAAGTAAAAGACTCGACTAACATTCTAAGTAATCATGTTTCTTCTACTTCACCAAGACGGAGGCCTTTACGCAACCATGTTCCAAATCTTCAGGTTCCTCCTCATGGTACCTTCTATAGTGCTCCTGACAGTTCCTTGTCAAGTCCATCAAGAAGTCCATTGAGGGCATTTGGCACAGATCAGGTGTTGAACTCTGCGTTTTGGGCTGGGAAGCCATATCAAGAGGTCAACTTAGCTGGGTCGGGGCATTGCTCTAGTCCAGGATCTGGTCACAATTCTGGGCATAATTCAATGGGAGGGGACATGTCAGGACCCTTATTTTGGCAACCTAGCAGGGGTAGCCCTGAGTATTCTCCAGTACCTAGTCCCAGAATGACAAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCTGTCACACCTATTCATCCTAGAGCTGGGGGAACAACACCCACTGAATCACAGACTGGACGGATTGATGATGGAAAACAACAGAGTCATCGTTTGCCCCTTCCTCCTTTATCAGTTACCAATTCCTCACCGTTCTCTCATTCTAATTCTGCAGCAACATCTCCGTCTATGCCAAGAAGTCCAGCTAGAACAGATAATCCAATGAGCCCTGGGTCACGTTGGAAAAAAGGAAAACTGCTTGGCAGGGGCACATTTGGACATGTCTATCTTGGCTTCAATAGTGAGAGTGGTGAAATGTGTGCAATGAAGGAGGTCACTCTGTTTTCAGATGATGCCAAGTCTGCGGAAAGTGCTAAGCAATTAATGCAGGAAATCCATTTATTAAGCCGTTTAAGGCATCCAAATATTGTGCAGTATCATGGTTCTGAAACAGTAGATGACAAGCTTTACATATATCTTGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAATATGGGCAATTTGGTGAACTAGCTATTCGTAGTTATACTCAACAAATATTGTCCGGCCTTGCTTATTTACATGCTAAAAATACTCTCCACAGGGACATTAAAGGAGCAAATATACTAGTAGATCCGAATGGTAAAGTCAAGTTGGCAGACTTTGGCATGGCAAAACATATAACAGGGCAATCGGGTCCATTGTCATTCAAAGGAAGCCCTTATTGGATGGCTCCTGAGATTATAAAGAACTCTAATGGATGCAGCCTTGCTGTGGATATATGGAGTCTTGGATGCACGGTTTTGGAAATGGCTACAACTAAGCCTCCTTGGTTTCAGTATGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACTATTCCAGATCATCTCTCAAATGAAGGAAAAGATTTTGTTAGAAAATGTCTACAACGTAATCCACGTGACCGCCCTTCAGCTAGTGAATTATTGGACCACCCTTTCGTGAAATGTGCTGCACCTTTGGAGAGGTCTATTCTGGTTCCTGAAGCTTCAGACCCTGTTACCGGGACTATGCAGGGAACAAAAAATCTGGGCATTGGACCAGGAAGAAATCTATCTGCCTTGGATTCAGATAAACTCTCCGTTCATTCTTCTAGGGTTTTGAGAAGTTATCCTCATGAAAGTGAAATCCACATTTCAAGGAATATATCTTGCCCTGTCTCTCCCATTGGAAGCCCACTTTTGACGTCAAGATCACCACAGCACATGAACGGTAGACTGTCTCCTTCTCCTATATCTAGCCCTCGGACCGCTTCTGGTGCTTCCACGCCTCTTACTGGTGGCAGCGGTGCCATACCATTTAGTAATAACTTAAAACAGCCAGTTTATTTTCAAGAGGGTCTTGGAAGCATCCCTAAGTCCTTGAATGGTGTCTACATTAATGGATCACCTCATCATGACTCAAATGTTGACATTTTTCGAGGAATGCAAATGGGGTCTCACATCACATCAGAACTTGCTTCCAGTGAAAATGATATTCTGGGTAAGCAGCTTGCTAGACCTCCTCATTCAGAGCCGTATGATTTTCAGTCAGTCTTGGCCGGTCGTGTCGGCCGGCAGCTGCTAGGGGAACATGTTAAGATTAATCCATCCCTTGATCTAAGTCCTAGATCGTCTTTGCTCCACCGGCCAAATGGTTTATGA 2703 0.4458 MPSWGVKSSSKETKKKASKESFIDTLQRKFRSLSEGKLSIIYGGSRRHCNDTISEKGDRSPTESRSTSPSRVGRCQSFAARPLSQPLPLPGLHPSNVGRVDSEISISSKSRPEKGSKPSLFLPLPAPGCIRWKPNPGDLEGDMVNASVFSDCSADSDEPVESRNRSPLAPDSDTGTKTAAGSPSGLMLKDQSSAVSQLNSREVKDSTNILSNHVSSTSPRRRPLRNHVPNLQVPPHGTFYSAPDSSLSSPSRSPLRAFGTDQVLNSAFWAGKPYQEVNLAGSGHCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTTPTESQTGRIDDGKQQSHRLPLPPLSVTNSSPFSHSNSAATSPSMPRSPARTDNPMSPGSRWKKGKLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSAESAKQLMQEIHLLSRLRHPNIVQYHGSETVDDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPNGKVKLADFGMAKHITGQSGPLSFKGSPYWMAPEIIKNSNGCSLAVDIWSLGCTVLEMATTKPPWFQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPRDRPSASELLDHPFVKCAAPLERSILVPEASDPVTGTMQGTKNLGIGPGRNLSALDSDKLSVHSSRVLRSYPHESEIHISRNISCPVSPIGSPLLTSRSPQHMNGRLSPSPISSPRTASGASTPLTGGSGAIPFSNNLKQPVYFQEGLGSIPKSLNGVYINGSPHHDSNVDIFRGMQMGSHITSELASSENDILGKQLARPPHSEPYDFQSVLAGRVGRQLLGEHVKINPSLDLSPRSSLLHRPNGL* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0651 900 SUPERFAMILY Protein kinase-like (PK-like) 410 751 IPR011009 -
Lja5g0651 900 MobiDBLite consensus disorder prediction 150 235 - -
Lja5g0651 900 MobiDBLite consensus disorder prediction 47 120 - -
Lja5g0651 900 MobiDBLite consensus disorder prediction 100 114 - -
Lja5g0651 900 SMART serkin_6 412 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0651 900 MobiDBLite consensus disorder prediction 281 415 - -
Lja5g0651 900 Gene3D Transferase(Phosphotransferase) domain 1 410 690 - -
Lja5g0651 900 MobiDBLite consensus disorder prediction 683 703 - -
Lja5g0651 900 MobiDBLite consensus disorder prediction 1 21 - -
Lja5g0651 900 MobiDBLite consensus disorder prediction 371 405 - -
Lja5g0651 900 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Lja5g0651 900 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 812 - -
Lja5g0651 900 Pfam Protein kinase domain 413 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0651 900 CDD STKc_MEKK1_plant 411 668 - -
Lja5g0651 900 MobiDBLite consensus disorder prediction 744 781 - -
Lja5g0651 900 MobiDBLite consensus disorder prediction 167 223 - -
Lja5g0651 900 ProSiteProfiles Protein kinase domain profile. 412 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0651 900 MobiDBLite consensus disorder prediction 281 300 - -
Lja5g0651 900 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0651 Lja-Chr5 5840671 5848268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0651 1 889 MAP Kinase Kinase Kinase AT1G63700 58.417 0.0 864
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lja5g0651 Pkinase 1.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0651 K20717 - gmx:100797994 1451.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2640 2 36636862 36645378 Lja5g0651 5 5840671 5848268 ECH
Lja5g0651 5 5840671 5848268 Lja5g0651 5 5840671 5848268 ECH
Lja2g2640 2 36636862 36645378 Lja5g0651 5 5840671 5848268 PCT