Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0637 ATGAACGCCGCCGCCGTGGCTTTGGCGTTGTTCTATCTAACCGCGGCGGTGGTGCCGTGGCGCGTTCTCTCGAAGGCAGAGCAGAGGCTTCAGGTGAACATGACGCTGGTGAAGAACGCTCGTGATACCGGTGCTTTGTGTTTGGATGGGAGTTTACCGGCGTATCATTTGCATAGAGGATATGGAGCAGGACAAGATAACTGGCTTCTTCAGTTTGAGGGAGGTGGGTGGTGCAATGACTTGACATCATGCTTGGAAAGAGCCAATACTCGCAGGGGTTCAACACTTTACATGACCAAGTGGGAGGTCTTCTCTGGTATTTTAAGCAACAATGCCACACTTAATCCAGACTTTTACAATTGGAACCGAGTGAAGCTGAGATATTGTGATGGAGCTTCATTTACCGGAGATAGGGTGTTCAATAATGGGACAACAACGCTTTACTTCAAGGGGCAAAAAATTTGGGAAGCCATTATTCGCGATCTTCTACCAAAAGGTTTAGGAAAGGCACGCAAGGCTTTGCTTTCAGGCTGTTCAGCAGGAGGTTTAGCAACCTTCCACCATTGCGACAACTTTGCCAAGTATTTGCCAGAGAATGCTAAAGTGAAATGTTTGAGTGATGCCGGTTTTTTTCTTGACGAAAGAGATGTAGGTTTGAATCACACTATGAGGTTCTTCGTCAAAAGTCTAGTATCATTACAGGGGATAGAGCAGAATCTGAACAGAAACTGCACAAGTGCCTTGTTCTTTCCAGACTTGTGTTTCTTTCCGCAATATGCGATACGATACATATCAACACCATATTTTATCTTGAACACCGCCTATGATGTGTACCAATTTAACCATATATTGGTGCCACCTACTGCTGATATGCATGGACACTGGAATCACTGTAAGCTGAACCCAGCAGCATGCACACCAGACCAAATTAAAACATTGCAAGGTTTTAGGCTCCACATGCTTGCAGCTTTGAGACCATTCACTATATACTCAGCAAGAGGGGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAATCGCAAGATACATGGTTTGGGGATGATTCACCAAGAGTAAACAACAAGACTATTGCAGAAGCAGTTGGTGGTTGGTATTTCAGCAGAAACAAAACCAAGGAAATAGATTGTGCATATCCATGTGATACAACTTGTCATAATCTTATACCATGA 1197 0.4403 MNAAAVALALFYLTAAVVPWRVLSKAEQRLQVNMTLVKNARDTGALCLDGSLPAYHLHRGYGAGQDNWLLQFEGGGWCNDLTSCLERANTRRGSTLYMTKWEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGDRVFNNGTTTLYFKGQKIWEAIIRDLLPKGLGKARKALLSGCSAGGLATFHHCDNFAKYLPENAKVKCLSDAGFFLDERDVGLNHTMRFFVKSLVSLQGIEQNLNRNCTSALFFPDLCFFPQYAIRYISTPYFILNTAYDVYQFNHILVPPTADMHGHWNHCKLNPAACTPDQIKTLQGFRLHMLAALRPFTIYSARGGMFINSCFAHCQSESQDTWFGDDSPRVNNKTIAEAVGGWYFSRNKTKEIDCAYPCDTTCHNLIP* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0637 398 Pfam Pectinacetylesterase 26 379 IPR004963 GO:0016787
Lja5g0637 398 PANTHER NOTUM-RELATED 24 398 IPR004963 GO:0016787
Lja5g0637 398 PANTHER PECTIN ACETYLESTERASE 9 24 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0637 Lja-Chr5 5709594 5717402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0637 10 398 Carbohydrate Esterase AT5G23870 65.995 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0637 K19882 - gmx:100802358 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0637 5 5709594 5717402 Lja5g0637 5 5709594 5717402 ECH