Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0635 ATGGAGTTCCTAAAGCTATTTGGAGTTTTTATTGCCTTCATGGCAGTACTTTGCCTGTTTTTGCTCTTCATACTAACACTTTACTGGTGGGTTTTTCCTAATCAAACCCACAAGAAGCTTAAGTTATGTGGGTTTGGAGGACCAACCCCAAGTTTTCCACTTGGAAACATTAAAGAGATGAAAAGAAAAAATAGCAGCATTACTCAATCTTCAGTTTCATCCTCCTCTAATATGATCCAACATGATATTCACTCACACGTGTTTCCCTACTTTTCTTGCTGGCAGAAATCACATGGTAAGGTGTTTGTGTACTGGCTTGGTACGGAGCCATTTTTGTACATTGCAGATCCTGAGTTTTTGAAGAAAATGTCCACAGAGGTTATGGCAAAGAGATGGGGAAAACCAAGTGTGTTTAGAAATGACAGAGACCCAATGTTTGGAAGTGGTTTGGTCATGGTTGAAGGCAACGATTGGGTTCGTCACAGGCACATTATCGCCCCTGCATTTAATCCCCTTAACCTCAAGGTCATGGGAAGCATGATGGTTGATTCCACAAATCAAATGATCGAAAGATGGACTACTCAAATAAGCTCCGGCAACCCCGAAATTGACGTGGAGAAAGAGATCATAGCAACCGCCGGAGAGATCATAGCAAAGACTAATTTTAGCATGGAAGATGAAAATGCTAGAGAGGTGTTTCACAAACTAAGAGCTTTACAAATGACTCTCTTCAAAACCAATCGCTATGTAGGTGTTCCCTTTGGCAAGTATATGAGTGTGAAGAAAACTTTGGAAGCCAAGAAGCTTGGGAAGGAAATCGATGAACTCTTGTTATCCATCATTGAAGCGAGGATGAAATCGTCAAAAAATAATTCTAAACAAGATTTGTTAGGGTTGTTGCTTCAACGGAATACCCTTGAAGGCCGGTCAGGGAAACCGTTGACGACGCGAGAAGTGGTGGATGAGTGCAAGACTTTCTTCTTTGGAGGCCATGAAACCACCGCACTTGCCATCACTTGGACCTTGCTGCTTCTTGCTACGCATGAAGATTGGCAAAATCAGCTGAGAGATGAGATTAGAGATGTGGTGGGAGAGAACGAACTTGATATCTCTATGCTTGCCGGTTTGAAAAAGATGAAATGTGTGATGAATGAAGTTCTGCGACTATACCCGCCAGCACCAAACGTACAAAGACAGGCAAGAGAGGACATTAAAGTTGATGATTTAACAGTTCCTAATGGAACCAACTTATGGATTGATTTGGTAGCGATACACCATGACCCTGAGTTCTGGGGAGAGGATGCTAATGAGTTCAAGCCAGAGAGGTTCATGGATGATGTGAATGGTGGGTGCAACCACAAGATGGGTTACTTGCCTTTTGGTTTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGACTTTTATGGAGTACAAGATTGTGTTGACACAGCTTCTCTCTAAGTTTAGCTTCAAGGTTTCACCAGGTTACCACCATTCTCCAGCTACCATGCTTTCCCTAAGGCCAACTCATGGACTCCAACTCATAGTTCAGCCTCTTTAA 1560 0.4263 MEFLKLFGVFIAFMAVLCLFLLFILTLYWWVFPNQTHKKLKLCGFGGPTPSFPLGNIKEMKRKNSSITQSSVSSSSNMIQHDIHSHVFPYFSCWQKSHGKVFVYWLGTEPFLYIADPEFLKKMSTEVMAKRWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIIAPAFNPLNLKVMGSMMVDSTNQMIERWTTQISSGNPEIDVEKEIIATAGEIIAKTNFSMEDENAREVFHKLRALQMTLFKTNRYVGVPFGKYMSVKKTLEAKKLGKEIDELLLSIIEARMKSSKNNSKQDLLGLLLQRNTLEGRSGKPLTTREVVDECKTFFFGGHETTALAITWTLLLLATHEDWQNQLRDEIRDVVGENELDISMLAGLKKMKCVMNEVLRLYPPAPNVQRQAREDIKVDDLTVPNGTNLWIDLVAIHHDPEFWGEDANEFKPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTQLLSKFSFKVSPGYHHSPATMLSLRPTHGLQLIVQPL* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0635 519 Coils Coil 519 519 - -
Lja5g0635 519 Pfam Cytochrome P450 77 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 514 - -
Lja5g0635 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Lja5g0635 519 SUPERFAMILY Cytochrome P450 83 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 Gene3D Cytochrome P450 28 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0635 519 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 6 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0635 Lja-Chr5 5673536 5676464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0635 1 519 Cytochrome P450 AT5G52400 59.429 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0635 - - gmx:100785284 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0635 5 5673536 5676464 Lja5g0635 5 5673536 5676464 ECH
Lja2g2621 2 35975319 35976916 Lja5g0635 5 5673536 5676464 PCT